KEGG   Macrobrachium nipponense (oriental river prawn): 135209995
Entry
135209995         CDS       T09903                                 
Name
(RefSeq) poly(U)-binding-splicing factor half pint-like isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
mnz  Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135209995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mnz03041]
    135209995
Spliceosome [BR:mnz03041]
 Complex A
  U2 snRNP components
   U2 related factors
    135209995
 Complex B
    135209995
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded RRM_DEAH11 RRM_3 Zn_ribbon_Com
Other DBs
NCBI-GeneID: 135209995
NCBI-ProteinID: XP_064098797
LinkDB
Position
39:1256566..1284231
AA seq 569 aa
MVHLLGQSLPRLSSDQKDAVARAKKYAMEQSIRLVLMKQTLAHQQQVCDACVCEGVLSFS
AASVRKTLESTLYDYEFVQAKSLQRHQALVLMCRVYVGSISFELKEDTIRQAFVPFGPIK
SINMSWDPVTQKHKGFAFVEYEMPEAAQLALEQMNGVMIGGRNIKVGRPSNMPQAQTVID
EITEEANYYNRIYVASVHQDLSENDIKSVFEAFGKIKHCMLTPGTTPGKHKGYGFIEYES
SQSAQEAIASMNLFDLGGQYLRVGKAITPPGSFYGPLTAPTQMPTAAAVAAAAATAKIQA
MDALATNAIGLVQGLSTSPSSSQIPPVGVVGGVSSVGSLGGGASVPPIGMVGDSPTTSTI
STPSSVPPVGVVTSLPTISGSATLPPPKVITSVPVPGITNSSTLSPTSNSVTTIAAGGGL
DELKANHQEELAKKLMDDSEPQTLQQQETMSIKGQSARHLVMQKLMRKTESSVVILRNMV
GIEEVDEFLQDEITEECGRFGTVNHVIIYQEKQSDEDDAEIIVKIFVEFSSPSESVKAQE
ALNGRYFGGRLVKAELYDQNMYNHNDLSG
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggttcacctattaggccagagcctgcctcgtctttcatcagatcagaaagatgcagtt
gctagagcgaagaagtatgcaatggaacagtctatacgtcttgttcttatgaagcaaact
ttagctcaccagcagcaggtctgtgatgcttgcgtgtgtgagggggtccttagcttttct
gccgcttctgtcaggaagacattagaaagtactctatatgattatgagtttgttcaagcc
aaatcactacaacgtcaccaagcgttggttttgatgtgtcgtgtttatgtcggcagcatc
agttttgaacttaaagaagacacgattagacaagcatttgttccatttgggccaatcaag
tccataaatatgtcttgggatcctgtcactcaaaaacataaagggtttgcttttgttgaa
tatgaaatgcctgaagcagcgcagcttgcccttgaacaaatgaatggtgttatgatcgga
ggacgcaatatcaaagtgggaagaccatctaacatgccacaggcccagactgttattgat
gagatcacagaagaagctaactattataatcggatatacgttgcctcggttcatcaggat
ctgtcagaaaatgatattaaatctgtttttgaagcctttgggaaaattaagcattgtatg
ttgacaccaggaacaacgccgggtaaacataagggttatggttttattgagtatgagagt
tctcagtcagcacaggaagccattgcatctatgaacctgtttgatcttggaggacagtac
ctgcgtgtaggcaaagcgataactcccccaggatctttctatggacctttgacagcccca
acgcagatgccaacagcagcagcagtggctgcagctgctgccacagctaaaatacaagct
atggatgcattagctacaaatgccataggattggttcaaggattaagcacatccccttcc
tcgtcacaaataccaccagtaggggttgttggaggagtttcctctgtgggttccttaggt
gggggagcttcagtacctccaattggaatggtgggtgattcccctacgactagtaccata
tcaactccttcctctgttcctccagttggagtcgtcactagtttacctaccatcagtggc
tctgccaccttaccaccaccaaaagttattacatcggttccagttcctggcattacaaat
tctagtactttatcacccacatctaatagtgttacaacaattgctgcaggtggagggtta
gatgaacttaaagcaaaccaccaggaggagttagccaaaaaattgatggatgacagtgag
ccacaaactctgcaacaacaggaaactatgtctatcaaaggccagtctgcgcgccatctg
gtcatgcaaaagctaatgagaaaaacagagtcatcagttgttatattgagaaacatggtt
ggtatagaggaagtggacgagtttcttcaggatgagataacagaagaatgtggacggttt
ggtactgtcaaccatgtcattatttatcaagaaaaacagtcagatgaagatgatgccgaa
attatagtcaagatttttgttgagttctctagtccaagtgaatctgttaaagcgcaagaa
gccctcaacggacgatattttggcggccggttagtgaaagcagaattgtatgaccaaaat
atgtacaatcataatgatttgtcgggatag

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