Macrobrachium nipponense (oriental river prawn): 135210025
Help
Entry
135210025 CDS
T09903
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03018
RNA degradation
mnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135210025
09123 Folding, sorting and degradation
03018 RNA degradation
135210025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135210025
03041 Spliceosome [BR:
mnz03041
]
135210025
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135210025
mRNA degradation factors
5'-3' decay
Lsm complex
135210025
Spliceosome [BR:
mnz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135210025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
RHH_1
Motif
Other DBs
NCBI-GeneID:
135210025
NCBI-ProteinID:
XP_064098867
LinkDB
All DBs
Position
39:2603475..2631220
Genome browser
AA seq
136 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGNLVSCDNWMNINLKDVICTSRDGDKFWRMPECY
IRGSTIKYLRLPDEVIDLVKEEVIARGRGRGETRGRGGPGRGRGGPGRGFGGRGRGGPGG
RGGPGRGGMKKKEGFK
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgctacccttgtctctactgaaaacggctcaaaaccatcctatgttggtggaacttaag
aatggcgagacttataatggcaacttagtgtcttgtgataactggatgaatattaatcta
aaagatgtcatctgtacatctagggatggtgacaaattttggaggatgccagagtgttat
atacgagggtctacaataaaatatttgagattgcctgatgaagtaatagatttggtaaaa
gaggaggtaattgcaagaggccgtggacgaggtgaaaccagaggtcgtggtggtcctgga
cgaggtcgcggaggcccaggaaggggttttggtggacggggccgtggtggtcctggtggc
agaggtggaccaggacgaggtggtatgaaaaagaaggaaggttttaaatag
DBGET
integrated database retrieval system
