Macrobrachium nipponense (oriental river prawn): 135210027
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Entry
135210027 CDS
T09903
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135210027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135210027
03036 Chromosome and associated proteins [BR:
mnz03036
]
135210027
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135210027
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135210027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
135210027
NCBI-ProteinID:
XP_064098869
LinkDB
All DBs
Position
39:complement(2812746..2941537)
Genome browser
AA seq
1867 aa
AA seq
DB search
MAALRMFGQPRPTFGGSSTGFGTSFSTPNTASTGFGSSFGKPAFGNPTTSFGAPAAPFGA
TTSSGPSLFGTNTQPQTASLFGQQQTSSGFGSSGGGLFSQSQPSTGSGLFGSNPSTGFGA
QQTTQNRPFGFGATSSTSTAGTTGLFGSTQSSTSGGLFNTPGFGSSNTLTGTTIKYDPTT
GSDTMTRNGVSTSIRTRIEVITTMKEYENKSLEELRVEDYLANRKGPGQGSTMTGFPQTT
QTNQGAGLFGAAPAPSMFATNKQGTENKSLFGTGTTPGFGTSTSGSLFGTSTSTFGQAAT
STPGFTFGQNTQTQKPTGFSFGSTTTASTPLFGATTSQPSTFGGLSTGFTFGQANQQPGT
GGLFGNQNKGFLSNQPASGGLFGNKPAGTTQPLGGTGFGATPSAFGTTPTTSTGGGLFGQ
TNQNKPGLFSGFGNTSFGTTSLFGNQNQQKPGLTFGTPGFGTTNTMGQGLGTSTGVSLFN
QGTSNTGSMAMGCLGTSAGFGFPQQNTMGGGMSGGVFPDLGKLVKAMTEKPIFDIAVSHK
SMAFAGQGSTSPTADQSSPKLTSGTLRPTYVLSPSLFANNKPRPKPINKSSNQGNNRHWL
FKGLDDPNEEATEDFLKPKKYPSVRKLNLRVFGAANSESSSTNESRNTTAAPAPSPLTTP
ISPLGGATPQRPSQPPSHENTPTPDIIKGRDKIKRRSLTEKQPLNDTLADLNVRQMVREE
EDEVQGEPINEEGDEIEVEDSENKENNNMSEPGVNELQVLAKTTDQPHPAGVKLTLPEYY
TLPSLEDLKDMIDSQGRCIVENLTVGRYGYGNVCFLGVTDVTNLDFDSLVSIYRKQVEVY
PEGTQKPPEGQELNKPAIITLDCVWPVDKTTRQLIKSPERLQTMGWSHYLERQCVKMDTN
FIEYRPSTGSWVFRVKHFSKYGLQEENEEEMDTLPAGGAPPTQTTSKSFVTVPVPLPPIS
TRAAGPPATATSLTSPPQFLGHIGASAFTCKAVQPRYLDSPSLQESQVLDEDFIEPDIAQ
EPEESAALSVLSPSDERLTVASKVPPRAVQLAKLQLFVDDEEEPQHLVRETTPTPQSIKA
TSKKLMLGHEVSYTRSSSPVESAGPKIKFGSQSQSGSIGEAPKVSISAEPSLPSLLRDSR
TEYQLLPSGKDVGKEAGHVPPQHQTATVPFVSSLMSSIDQRLSDMGAFMGRSFRVGWGPG
WTLVHAGKQLASLRIPEETEVEMTEDEPPSPVSFFFLGSSVTQPKRAKTTSSTSYKLVIE
QLHAVQADPHTFDHLTEACLNDVWKYSVLTKDGKGETDSSSCPHYRPVKDRELLHQLALT
ASSAGIEHEGVSNIFNLCVGLWGRLHFYSPESDGANEYSQSRARVEAVSQWLENVNSSIV
QEEVLYAMSQDGEENYLPAIFSHLTARQISEACMLAQSKGDHHLALLLAQSCMGEDSPRQ
ILAQQLSNWVEGGTYAMMSPERLVLYCILAGAPTHQASNTTINTCQGLDWKRAFALHLWY
MCPATSTIAEVLQEYDQAAGLKGDVPSYCEAPLPSYLTHHGHDGDTVKFDVCYHLLKLFT
DPMHRLETLLNPGTVTSDPVDVTVSWLLWRVLESLGYHHLSEHLSAGLHLSMAALLEATG
QWHWAAFVLLNIVDEERRTKEVQTLLQRHIVVGKDMEADLKYNMKENFIVEELHIPQKWI
YEAKAIKARVLNMVDEEAWYLLKAGDYNRAHMLIVDTIAPNSIVNEDHDYLQGYLDQFCD
DGVRNKVVDWFIGGGVYTDYLDVCSVVDDMKRSADPTPAQLEQLRPRLLALCSRLNNLKC
STATHRLCVSEMSRVVVGVLRAVVGDGADATQVLSQQLSGLPLTHDYALAELNLVTEHYL
AHLSTYD
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atggctgcattaagaatgtttgggcaacctcgtcccacctttggtggttcatcaacagga
tttggaaccagcttcagcactccaaacactgcttccactgggtttgggagtagttttggt
aaacctgcttttggaaaccctaccacaagttttggagcccctgctgctccatttggtgcc
accacctcttcaggtccttcactatttgggacaaatacacaaccacaaactgcaagtttg
tttggccaacagcagacatcatcaggttttggctcttctggtggtggattgtttagtcag
agtcagccgagtactggctcaggtttgtttggaagtaatccctctactggatttggtgct
cagcagacaacacagaatagaccttttgggtttggtgccaccagcagcaccagcaccgct
ggaacaactgggctgtttggatctacacagtcgtcaactagcggtggactgtttaataca
ccaggatttggttctagtaacaccttaactggaacaaccatcaaatatgaccctacaact
ggatctgacaccatgacaagaaatggtgtgtcgaccagtatccgcactcggattgaggtt
ataactaccatgaaagaatatgagaataaaagcttggaagaactgcgtgtagaagattac
ttggccaaccgcaaaggaccaggacaaggttccaccatgactggttttccacagacaact
cagacaaaccaaggcgctggtctttttggggctgccccagcaccatctatgtttgctaca
aataagcaaggtacagaaaacaagtccctatttggaactgggactaccccaggttttggg
acgtctacctctggaagcctttttggaaccagtacttcaacctttggccaggcagcaaca
tccactcctggatttacctttggccaaaatacacaaactcagaagccaaccggtttcagt
ttcggaagtacgaccactgcttcgacacccctgtttggggctacaacatctcagccctca
acatttggtggtctgagcactggctttacttttggtcaggccaatcaacagccgggtact
ggtggtctgtttggcaatcaaaataagggctttctctcaaaccagcctgctagtggaggt
ctttttggtaataaaccagctggtaccacacaaccgttaggaggaaccggctttggtgcc
acaccatcagcatttggcacaactcctaccaccagcactggaggtggcctttttggacag
actaatcagaataagcctggattattttctggttttggaaacacgagctttggcaccact
tcactgtttggcaatcagaaccagcagaaaccaggtttgacctttggaactcctggtttt
ggaacaacgaataccatgggtcagggtttgggcacgagcacaggtgtcagtctgtttaac
cagggtacatcaaacactggcagtatggcaatgggatgccttggtactagtgcaggcttt
ggattccctcagcagaatactatgggtggaggaatgagcggaggagtatttcccgatctt
ggcaagcttgtaaaagctatgaccgagaagccaatttttgacattgctgtctcacataaa
tctatggcatttgcaggtcaaggcagcacgtcacctacagctgaccagagcagtccgaag
ttaacgagtggaactttgcggcctacctacgtcttgtcaccttcactgtttgccaataat
aaaccgagaccaaagcccataaacaaaagcagtaatcaaggaaacaatcgccactggctt
ttcaagggtctggatgatcctaatgaggaagcaactgaagatttcctaaagccaaagaaa
taccctagtgtaagaaaattaaatttaagggtgtttggagctgcaaattctgaatcttca
tccactaatgaaagcagaaacacaacggctgcccctgcaccttctccattaaccacgcca
atatcaccattgggcggtgctacaccacagcggcctagtcagcctccatcccacgagaat
actccaacaccagatattattaagggacgagacaaaataaaaaggcgaagcttgactgaa
aagcagccgctgaatgatacactggctgatctcaatgtacgccaaatggtcagggaagaa
gaagatgaggtgcaaggtgagcctataaatgaagaaggagatgaaattgaagttgaggac
tctgagaataaagaaaataataacatgagtgaacccggagtaaatgaactacaggtttta
gcaaagacgacagatcagcctcatcctgcaggtgtcaagcttacgttacctgagtattac
accttaccatctctggaagacttgaaggacatgatagattcacaaggtagatgcattgtg
gaaaatcttactgttgggagatatggctacggcaacgtgtgcttccttggtgtcacagat
gtcacaaatttagattttgacagcttggtctccatataccgcaagcaggtggaagtatat
ccagaaggaactcagaagccacctgaaggtcaagagttgaacaagccagctattattaca
cttgactgtgtttggccagttgacaagacaactcgtcaattgattaagtctccggaaagg
ttgcagactatgggatggtcacattacttagaacgtcagtgtgttaaaatggatacaaac
ttcattgagtatcgtccctccactggttcttgggtcttcagggtgaaacacttttccaaa
tatggacttcaagaggaaaatgaggaagagatggacactcttcctgctggtggagcccca
cccacacaaactacaagtaaaagtttcgtgacggtaccagttcctcttccccccatttcc
acccgtgcagctggaccaccagcaactgccacatctcttacttccccaccccaattctta
ggacacataggtgcttcagctttcacatgtaaagcggttcagcctagatatttggacagt
ccttcactacaggagtcacaggtgcttgatgaggatttcattgagccagatatagctcaa
gagccagaggagagtgctgctttaagtgtgctgtcccctagtgatgagcgcctaactgtg
gcttccaaggtaccacccagagctgtccagttagcaaaactacagttatttgttgatgat
gaagaagagccacaacaccttgttagggaaaccactcccacaccacaatcaatcaaagct
acttctaagaaactaatgcttggtcatgaagtgagctatacaagatcatcaagtccggta
gaatcagctggacctaaaataaagtttggctcacaatcccaaagtggaagtattggtgaa
gcacccaaagtcagtatctctgctgagcctagccttccttctttgttgagggattcccgg
actgagtatcagttgctgcccagtggaaaagatgttggcaaagaggctggtcatgttcct
cctcagcaccaaacggcaactgtaccatttgtctcatccctgatgtctagtatagaccag
cgcttatctgacatgggagcctttatggggcgttcatttagggttggatggggaccaggc
tggacgctggtccatgcggggaaacagttagcctctcttagaatacctgaggagactgaa
gttgagatgacagaggatgaaccaccatctccagtttctttctttttcttgggatcatca
gtcacacaaccaaaaagagccaaaacaacaagttctaccagttacaaattggttattgag
caacttcatgctgtacaggcagatccacacacatttgatcatttaactgaagcatgccta
aatgatgtttggaagtacagtgttctaacaaaagacgggaagggtgaaactgacagttcg
tcatgtccccattatcgtcctgtgaaggacagagaacttctccatcagttagctcttact
gcatcctcagcaggcattgagcatgaaggagtttcaaatatattcaacctttgtgttgga
ctgtggggaagacttcatttttattctcctgaatcagatggtgctaacgaatactctcag
tcacgagcaagagtggaagctgtgagccagtggctggaaaatgtcaacagctcaattgtt
caagaggaagttttgtatgctatgagtcaagatggtgaagaaaactatcttcctgcaata
ttttcacaccttactgctaggcagatctctgaagcttgtatgttggctcagagtaaaggt
gaccaccacttggcacttttactggcacagtcatgtatgggtgaggacagccctcgtcag
atacttgcccagcagctaagcaattgggtggaaggaggaacttatgctatgatgtctcca
gaacgattggtactgtactgcattttagctggagcaccaacccaccaggcttctaacact
actattaatacttgtcaagggttggattggaagagagcttttgctctgcatttatggtac
atgtgcccagctacatcaacaatagcagaagtactgcaagaatatgatcaagcagcagga
ctcaagggggatgtgccaagctattgtgaggcaccacttccttcttacctcacacaccat
ggtcatgatggagatacagtgaaatttgatgtctgctaccatctcctgaaactcttcaca
gatcctatgcatagattggagacactactgaaccctggaactgttacgtctgatcctgta
gacgttactgttagctggcttttgtggcgtgtattggagtcgttaggataccaccacctg
tccgaacacttgagtgctggattacacctgagtatggccgctttattggaagccactggt
cagtggcactgggcagcatttgtcttattgaacattgttgatgaggaaagacgaactaaa
gaggtacagacactcttgcagcgccacatagttgtcgggaaggatatggaggcagatctt
aaatataacatgaaagaaaactttattgtagaggagttgcatattccacagaagtggatt
tatgaagcaaaagccatcaaagccagggttttgaacatggttgatgaagaagcgtggtat
cttttgaaggctggtgactacaatagagctcatatgcttattgttgacactattgcacca
aattctattgtcaatgaggatcacgattacttacaaggctaccttgatcagttttgtgat
gacggtgttcgaaataaggttgtggattggtttattggtggtggggtctatacagactac
ttggatgtttgctcagttgttgacgatatgaaaagatctgcagacccaactccagcccag
ttagaacaacttcgtccaagactgcttgccctctgttcaaggttgaataatttgaaatgt
tcaactgctacccatagactttgcgtatctgaaatgagccgtgttgttgtgggagtatta
cgggctgtagtaggtgatggagccgatgcaacacaggttctatctcagcagttgtcaggc
ttgcccctaacacacgattatgctttggcagagcttaatttagtaacagaacattatctt
gcacatctttcaacatacgactga
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