Macrobrachium nipponense (oriental river prawn): 135210183
Help
Entry
135210183 CDS
T09903
Name
(RefSeq) neuronal PAS domain-containing protein 4A-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnz03000
]
135210183
Transcription factors [BR:
mnz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135210183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_NPAS4
PAS_3
HLH
PAS
Motif
Other DBs
NCBI-GeneID:
135210183
NCBI-ProteinID:
XP_064099083
LinkDB
All DBs
Position
39:20385637..20504305
Genome browser
AA seq
699 aa
AA seq
DB search
MEERIFTVLKDYFDFEGTKSTKGASKMRRDLLNAEISQLRDLLPLPSSTRQRLSQLQLMA
LVCVYVRKSNYFQQAMKHAPATRADAPNLEFLKALSGFLMMLTQGGKLLYISDNAAEYLG
HSMEDLLIHGDSVYDIIDKQDHAAVQAELLRGSQVTSSASSSVLSLDEDRLFLCRMNVSR
NARRQMRFGDQKVVIVAGHYLSYLPLCSRNEPVFLAHCTPVAMPETRESVVLGATNVFTS
VHTLDMKFINLDKIGEFYLGYNRSSLAGVSWYHLIHPENMREAQTKHRLITTSEQDRSCI
LLLRLQAAGGAWRWVHCVLQVKDGAESCQQTQLGALTGPPPITSGSGSASAAGASSSSSS
SSSSSSTTASSNSSSSSASSSNGSGSGSSSSTSSGSTQQPVIVATNQVLGDREAAVLRAN
SWLYHYYSMQSKLQYGLAYDAHAQRVHAYYPQVMTYQSDPGAAYMNSSALNGTHYHQPYA
PATAHAPYSLTTPSAYAHLQHYHHHYSVRLQHGLDYSRDAAWGYYDTNHTSNTTSSSSSS
SATHGHASSTSRSSRSSESPTDTKRRSSPSVNHGVSEGSGGGAGAAAAAAAAAAGGGVAV
ATPVAVRAAPAGVHKGASSPELEHLDVPWKASPTQEVPDYPEYSPYITPPYSAATPTKHH
VFSFDPNDPRDAHTQHDQHVPSGPADPRDAPWYSHAFVR
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaggattttcaccgttttaaaggactatttcgacttcgagggcacgaagtcc
acgaagggcgcctccaagatgaggcgtgacctcctgaacgctgaaatcagccaactgagg
gacctcctgccgctgccgtcgtccacacgccagaggctctcccaactgcagctgatggcc
ctcgtctgcgtctacgtcaggaagagtaattacttccagcaagctatgaaacatgctcca
gccactcgagcagatgcacctaacctggagttcttgaaggcactaagcggctttctgatg
atgctcactcaaggtggaaaattactctacatctctgacaacgctgccgagtacctcggt
cactccatggaggacctcctgatccacggcgacagcgtctacgacatcatagacaagcag
gaccacgccgccgtccaggccgagctcctgaggggctcccaggtcacttcgtcagcctct
tcgtcggtcctctcgctcgacgaagatcgcctcttcctctgccgcatgaacgtctccagg
aacgccaggaggcagatgcgcttcggcgatcagaaggtcgtcatcgtcgccggccactac
ctctcctaccttcctctgtgttcgaggaacgagccggtgttcttggcgcactgcacgcca
gtggccatgccggagacgcgcgagagcgttgtcctaggagccacaaacgtcttcacgtca
gtccacaccttagacatgaagtttatcaatctggataaaatcggcgagttctatttggga
tacaaccgttcgtccctcgccggcgtctcctggtaccacctcattcatccggaaaatatg
agggaggcgcagacgaagcacagactcattactaccagcgagcaagaccgttcctgcatc
ttgttgcttcgactccaggccgccggaggcgcctggcgttgggtccactgcgtcttgcaa
gtcaaagatggcgccgaatcctgccagcagacgcaactcggcgccctcacaggccccccg
cccataacgagcggcagcggaagcgccagtgcagcaggtgccagcagtagcagcagcagc
agcagcagcagcagctccacaactgccagcagtaatagcagcagtagcagcgctagcagt
agcaacgggagtggcagcggtagtagcagcagtactagctctggttcgactcagcagccc
gtgattgtggccacgaatcaggtgctcggagatcgtgaggcggccgtgctgagggctaat
tcttggctctatcactattattcgatgcagtccaagttgcaatacgggttggcgtacgac
gcgcacgcgcagcgagtgcacgcgtattacccgcaagttatgacatatcagagtgaccca
ggagccgcctacatgaattcttccgccctgaacggcacccactaccatcagccatacgcc
ccggcaactgcgcatgctccctactctctaacgacgccatccgcttacgctcacctccaa
cactatcaccaccactactccgtccgtctccaacacggcctggactactcgcgagacgcc
gcgtggggttactacgacaccaaccacacctccaacacgacttcgtcatcatcatcttct
tcagcgacccacggccacgcgtcctcgacctcccggagcagtaggtcctccgagtcaccc
acagacaccaagaggaggtcctcgccttctgtcaaccacggcgtctccgagggcagcggc
ggcggagctggtgccgcagcagcagcagcagcagcggcagcaggagggggcgtggccgtt
gcaaccccagtggccgtgagggctgcccctgcgggagttcacaaaggggcttcctctccc
gagctggaacacctcgacgttccctggaaggcttcgccgacgcaggaagtgcccgattac
ccagagtactccccttacatcacgcctccttactcggctgctacgcccacgaagcatcac
gtcttctccttcgatcccaacgatccgagggacgcccacactcagcatgaccagcacgtg
ccctcaggacctgctgatccaagagatgctccttggtattcccacgccttcgtcaggtga
DBGET
integrated database retrieval system
