Macrobrachium nipponense (oriental river prawn): 135210217
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Entry
135210217 CDS
T09903
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03082
ATP-dependent chromatin remodeling
mnz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135210217
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135210217
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mnz01009
]
135210217
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnz03021
]
135210217
03036 Chromosome and associated proteins [BR:
mnz03036
]
135210217
Protein phosphatases and associated proteins [BR:
mnz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135210217
Transcription machinery [BR:
mnz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135210217
SWI/SNF complex
135210217
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135210217
PBAF complex
135210217
SWI/SNF complex
135210217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
135210217
NCBI-ProteinID:
XP_064099123
LinkDB
All DBs
Position
39:24734448..24834386
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AA seq
374 aa
AA seq
DB search
MAKTYGDKPVSFQLEENGEFWCIGSEVGNYLRLFRGSLYKKFPGMYRRSITNDERKKLME
LGLTQHVLASNISLLRASEVEDIIEGNEDKYKAVSVRQQQDPEAAAARAEQRQVKKPAAP
WVPTISNSSHLDAVPQATPINRNRIISKKIRTFPMCYDDLDPAQIHENSCQREELVPIRL
DMEIEGQKLRDTFTWNKNEMLITPEQFAELLCDDLDLNPIMFVPAISTAIKQQIDQYPSQ
SIIAENSDTRIVIKLNIHVGNISLNDQFEWDMSEPENSPEDFASKLCSELGLGGEFVTAI
AYSVRGQLFWHQRTYAFSEAPLPCVEVPFRSQSEADQWSPFLETLTDAEMEKKIRDQDRN
TRRMRRLANTTPGW
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaacttacggagataaacccgtgtctttccagttggaagaaaatggagaattt
tggtgcattgggtccgaggttggtaactaccttcgactgtttcgagggtcactttacaag
aaatttcctggtatgtaccgccgatcaattacaaatgatgaacgaaagaagttaatggaa
ttgggtcttacccagcacgttttggcgtcaaacatttctttgctgagagcatcggaggta
gaagatatcattgaaggtaatgaagataagtacaaagctgtctctgtgcgccagcagcaa
gacccagaagcagcagctgcaagagctgaacagcgtcaggtgaagaaaccagctgcccca
tgggtgccaacaatatctaattcatctcatttggacgctgtccctcaagcaacaccaata
aacaggaaccgtatcatttccaagaagattcgaacattccccatgtgttatgatgactta
gatcctgcccagattcacgaaaattcatgtcagcgggaagagcttgtcccaattcgttta
gatatggagattgagggacagaagcttagggatacattcacttggaacaaaaatgaaatg
ctcatcacccctgaacagtttgcagagctcttgtgtgatgatttggatttgaaccccatt
atgtttgtgccagcaatttcaacagccataaaacagcaaattgaccaatatccatctcag
tcaatcattgcagaaaattctgataccagaatagttattaagttaaatatccatgttggg
aacatttcccttaatgatcagtttgaatgggacatgtcagaacctgaaaattctcctgag
gattttgcctctaaattatgctctgaactgggcctaggaggagagtttgtaacggcaata
gcatattctgtacggggccaactcttttggcatcagcgaacatatgccttcagtgaagct
ccccttccatgtgttgaagtaccattccgatctcagagtgaagcagaccagtggtctcca
ttcctggaaacccttacagatgctgaaatggagaagaaaatcagagatcaggacagaaat
accaggcgaatgcgtcgtcttgcaaatactactcctggatggtaa
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