Macrobrachium nipponense (oriental river prawn): 135210320
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Entry
135210320 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 24-like
KO
K15167
mediator of RNA polymerase II transcription subunit 24
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnz03021
]
135210320
Transcription machinery [BR:
mnz03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
135210320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med24_N
Motif
Other DBs
NCBI-GeneID:
135210320
NCBI-ProteinID:
XP_064099271
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All DBs
Position
39:complement(42781135..42913378)
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AA seq
981 aa
AA seq
DB search
MGPLPNSLILSYLRHSLSSQIVSYGGVIESISNYDGLHKPHCVQALLDLMQSMMKSVSCR
GKPEDCLVLATSLVNGVKWLVQVMGWTTQQLLDLRKAPEHTTNLSLATSVLQDILSCQFL
TCMLEIGRREEPGVWSANLKKMTEVETLLAGAGTIVENKDNYIKILSQLRDHQPLDSVGR
KHKFNSNNVPLCYAMHSVIMLEVNMHTTRDAGTFAQQLLLLQRLQGLETMELYLEILRCC
FIGLSNPEYQSYQELKWVGFTFIKVPVILQAIHVVLAGESATGESEDLLAAIKRLSQLNY
LLDQVDLQINCNCLEFLLNEMCNKTSLILERDAQAILATRVQESNVLGNIQKNDTQGSHP
GNPNLILLAQPTVSNILKTLSNKNQESVLPVMSRLISGKSRDLLLAAAAASGSLHIFAQK
VVKFNELSMDPQPGETPKMAVSRAQMFDISFLLLCHIVQIYGIDVVVSEKCETFIEQWMR
DNMPELGKVKAPLISAHTDQSAVEDFIRQVNISEIEMKYNMVRWSDVCQMAGVALKEVVT
AAQHGALPVQQVKELIDRLRYHSCCLPICVAAWLCSHVQVVDGEQSVQPLSFLQYLQASL
GDHDPAIPTLENFKDRSNLLVLIVENMIQVTKGGIHSSSAAGSNGSISGTNGNDVSMAME
TNTVCLLSSQEPLSHLLKCTWQQIFPSGILNHKALCTFRDLLRLXGTRWFVSDIVKCGMQ
IVFASDLNRAIDLIFGLLHQDVVGCTLSLLVHTLPMYMTGPNSDDLACEPRTHALARLTV
MMIISAWLVVQQPSVKSEAGATVNLANGGLSCPRKRTYHDRELEEMETNLQLHSGELAIP
RGTPGLSRDGTSLLVAVESLLKLMTQVSRAGVVSPVSQLVVNILHELIGAPYSHTLLTLT
PPALLPNLVPLLSNADAFTYAQLLAITSPKASVLPDVTKDFAGDLIGAQTPAQAAGARRA
AAKLLCVQRNLALSTASSSEC
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgggacctcttcccaacagtcttattttgtcatatttacggcactccctcagttcacag
attgtctcatatgggggtgttatagagagtattagtaactatgatggtcttcacaaacct
cattgcgttcaagctttgctagatctcatgcaaagtatgatgaaaagtgtatcatgtcga
gggaaacctgaggattgtttagtactagccacgtctttagtgaatggtgttaagtggctt
gtccaggtaatgggatggactacacagcagcttcttgatctacgcaaagcaccagagcac
accaccaacctgtcactggcaacgtcagttttacaagatatacttagctgccagttcctc
acgtgcatgctggagataggccgcagagaagaaccaggtgtctggagtgcaaatctaaaa
aaaatgactgaagtagagactctccttgctggtgccgggacaatcgtggagaataaagac
aattatataaagattcttagccagttgcgtgaccatcaaccattggacagtgttggtaga
aaacacaaatttaatagtaacaatgtccccttatgttatgccatgcatagtgtgataatg
cttgaagtaaacatgcacacaacccgggatgcaggtacatttgcccagcagttattactt
ttgcagcgactccagggattggagaccatggaactctacttggaaattttgcggtgttgc
ttcattggcctcagcaaccctgagtatcaaagttatcaagagctaaagtgggttggtttc
accttcatcaaagtcccagtcattttgcaggctattcatgttgtattagcaggtgagtct
gctactggagaatcagaggatcttcttgcagccatcaaacgtttatctcagcttaattat
ttgcttgatcaggtggatttgcaaataaattgcaattgcttggagtttttactgaatgaa
atgtgcaataaaaccagtctcattcttgaaagagatgcacaagctatacttgcaacaagg
gtgcaggagtctaatgtgcttggaaatatccagaagaatgacacacaagggtcacatcct
ggcaatccaaatcttatcttgttagcacaaccaactgttagtaatattctcaagactctt
agcaacaaaaaccaggagtctgtactacctgtcatgagccgtctaataagtggaaaaagc
cgagacctgctgctggctgctgctgctgcctcaggaagtttgcacatatttgcacagaaa
gttgtgaaatttaatgaactgagcatggatccacaacctggtgaaactcctaaaatggca
gtcagccgagcccagatgtttgacatctcatttttacttctctgccatattgttcagatc
tatggaatagatgttgtggtatctgagaagtgtgagaccttcatagaacaatggatgcga
gacaacatgccagagttggggaaagttaaagcaccactcatatcggcccatactgatcaa
agtgctgttgaggatttcatcagacaggttaatatatcagaaattgaaatgaaatacaac
atggttcgctggagtgatgtgtgccagatggctggggtagcactaaaggaagtcgttact
gcagcacaacatggagctttgcctgtccagcaggtcaaagagcttattgatcgtcttcga
tatcattcatgctgtctgccaatatgtgttgcagcttggctttgctctcatgttcaggtt
gtggatggggagcagtctgttcagcccctcagctttcttcagtatttacaggcttcactt
ggagaccatgatccagcaattcctacccttgaaaacttcaaagacaggtcaaatttgcta
gtccttatagtagaaaatatgatacaagtgaccaagggaggcatccattcctcttcggca
gcaggcagcaatggtagtatcagtggaaccaatggaaatgatgtcagcatggcaatggaa
accaatactgtttgcctactttcatctcaagagcccctctctcacttgctgaagtgcacc
tggcaacagattttcccaagtggaattttgaaccacaaagctctctgtactttccgtgac
cttctcagacttngcggtacaagatggtttgttagtgacatagtcaagtgtggcatgcag
attgtctttgcctcagacctgaaccgtgctattgacttgatatttggtcttctacatcaa
gatgttgttggatgtactcttagtttattggttcatacactacccatgtatatgactggc
ccaaattctgacgacttggcatgtgaacctaggactcatgcccttgcacgcttgactgta
atgatgatcatctcagcttggttagtggttcagcaaccatctgtgaaatcagaggcggga
gctactgtgaatttagcaaatgggggactttcttgcccaagaaaacgtacataccatgac
cgggaactggaggaaatggaaactaatctccaattgcattcgggagaacttgcaatacca
cgtggaactccagggttaagtagagatggcacttctctcttggttgctgtggaatcactt
ctgaaactaatgactcaggtaagccgtgccggtgtggtaagccctgtgtctcagcttgtt
gtaaatattttacacgagttaattggtgctccttatagtcatacacttctcactttgact
ccaccagcactactcccaaatttagtgccactcttgtcaaacgcagatgcttttacctat
gctcaacttcttgcaataacatctcccaaggcttctgtccttcctgatgtgacaaaggat
tttgcgggtgacctaatcggagcacagactccagctcaggctgcaggtgcaaggcgagca
gcagctaaattgctgtgtgtacagcgaaatttggctctttctactgcatcatcatctgag
tgttaa
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