Macrobrachium nipponense (oriental river prawn): 135210381
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Entry
135210381 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04120
Ubiquitin mediated proteolysis
mnz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135210381
04120 Ubiquitin mediated proteolysis
135210381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnz04121
]
135210381
Enzymes [BR:
mnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135210381
Ubiquitin system [BR:
mnz04121
]
Ubiquitin ligases (E3)
U-box type E3
135210381
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
135210381
NCBI-ProteinID:
XP_064099358
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All DBs
Position
39:21492850..21626484
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AA seq
1086 aa
AA seq
DB search
MVVTLRWNEDEMQGIQLPTSPKCPKKKKKKTTSLLPSPHKRQPPPSPLDITPCKKGLEEP
MEVETKAETPTSLETGHYGSDNKRPRSVSTSEVTEELVLSTLSNVLQAKWQDVTTTCPIT
VQVLSAAKKAEITSQVLMEVTMRVCAGENIEGLVDPNYTSDSPELSASPTGSSSNADLSE
LTRMINRPETTALQYLLQTFARVKAEEKAHPKRSNSPPLSTVLLDVRRQCVAHAALLLSG
CLTNSLAPLPSLLLHPLLTDSLPRGFLCDLIQHTYENGDLFNKVFGPLLLGLSTTMRSCS
VTSSLYIKVLESLDLLIDMRLNNATNSNHRPICSLLTSMSNWCSSTEHPAAGREMLFTTL
FGPFLGLSLFAEDDPKVVEKFIKNVSNRTIPDGLQDLAKELDHVRTTILHKLFRSMLLNP
SSREPVLSFLAKLIRCNERRAQIHVEERLVAGDGPMINLLSVLQQLCFKVKLDKVDPXLF
NTHPNHSVDVSKDSRLSMTQEEVDEWVRKQRSEGCSKFQPVTFHSSVLVLTLHAHHLXVL
PVMRKYTRRLRAIRDLQKMVEEIESTESQWANLPVASRQRELLKKWKLQLKKLNKSRICA
DAGLLDENLLERCMHHYSGAAQVILRILTGDQNTLAPLGVTLADTANFLPLPSELPELFA
ALPEWYLDDLAEFLLFTLQYVPKVPINNLGDPIITMTIVLLCSPSHIKNPYLTAKFVEVL
FMLTPSVQQHVDTLHERVLHHPLAVHLPVALMKFYTLVESTGASSEFYDKFTIRYHISII
FKSFWNDRQHRQAVITESNSGKEFVKFVNLLMNDTTFLLDESLDALKRIHEVQEEMERGT
WSKQTREQQQSRQRLLATDERQCRSYLTLARETVDMMHYLTQEVPVPFLRPELCDRLAAM
LNFNLAQLCGEKCGNLKVRQADKYGWEPRKLLEQIVDIYLHLDSDKFAEAIATDERSFKR
ELFETAASKLERAVIKSSSEVAKCSFSSIGQKAFSVQQANQKKDEDYSDAPDHFMDPLMQ
TLMEDPVELPSGVVMDRPTIVRHLLNDPTDPFTRQPLSEEQLKPAEALKKEITDWIAAKS
NPKSTS
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtcactctacgctggaatgaggacgagatgcagggcatacagttgccaacgtct
cctaaatgccccaaaaaaaaaaaaaaaaaaacaacatcactgctgccttctccacataaa
agacaacctccaccttcaccactagatattactccttgtaaaaagggtttagaagaacct
atggaagtagaaaccaaggctgaaactccaaccagcttggagacaggtcattatggcagc
gacaacaaacgtcccaggagtgtcagtacaagtgaggtaacagaagagttagtgctttca
acgttatcaaatgtgcttcaggccaaatggcaagatgtcactactacttgcccgatcaca
gtacaagttttatcagccgctaaaaaagctgagatcacatcccaggtgctgatggaggtc
actatgcgcgtgtgtgcaggggagaacatagaagggttggtggatccaaactatacatct
gattcaccagagctcagtgcctcacccacaggaagtagtagtaatgcagacctgagtgag
ctaacaagaatgattaatcgtccagaaacaacagctctacagtatcttcttcagacattt
gctagagtcaaagctgaagagaaagcccatccaaagagaagcaattctcctcccttgtca
acagttcttttggatgtccggcgacagtgtgtagcacatgctgcattgcttttatcagga
tgccttacaaattctttagctcctcttccatccttgttgcttcacccattgctgactgat
agtctgcctaggggattcctctgtgatctcattcaacatacctatgaaaatggggactta
ttcaataaagtgtttggacctttacttttggggctgagcacaacaatgaggagttgcagt
gtaacttcgtccttgtacataaaagttctagagtctttagacttgttgattgatatgagg
ctaaataatgctaccaactccaaccaccgacctatatgtagcctattgacctcaatgagt
aactggtgttcaagtactgaacatccagcagctggtcgtgagatgttgttcactactctc
tttgggccattcttaggtttatcattgtttgctgaagatgatcccaaagtagtggagaaa
ttcatcaagaacgttagtaacagaactattccggatgggttacaggatttggccaaagaa
ttggaccatgttcgcactaccatcctgcacaaattgtttcgtagcatgttactgaatccc
tcatcacgtgaaccagtcctgtccttccttgcgaagttgattcggtgcaatgaacgccgg
gcacagatccatgttgaagaaagacttgtggccggagatggccctatgatcaatttgctt
tcagttttacaacaactttgttttaaggtgaaattggacaaagtggatccttagttattt
aatacccatccgaatcactccgtagatgtgagtaaagattcccggctctctatgactcaa
gaagaggtcgacgagtgggtgcgaaaacagcgatctgaagggtgctccaaattccaacca
gtaacatttcatagttcagtgttggttctaacacttcatgcccatcatttangtgtctta
cccgttatgcggaagtatacgagacgattaagagcgatacgggaccttcaaaagatggtg
gaagaaatagaaagtacagaatctcagtgggccaatctccctgtagcttcaagacaacga
gagttgttaaaaaaatggaaactgcagctaaagaagctaaataaatcccgaatctgtgcc
gatgctggcctgttagatgagaacctgttggaaagatgtatgcatcactactctggagca
gctcaggtaatattacgtatactcacgggcgatcagaacactttggcacctctgggggtg
acgcttgctgatactgccaacttcctgcctcttccatctgaattgcccgaactctttgct
gcactgcctgagtggtacctagatgatttggcagaattcttattatttacattacaatac
gtccccaaggttcccatcaataatcttggggatcccatcatcaccatgactatcgtcctg
ttgtgctctccgtcacacataaagaacccatatctcactgccaaatttgttgaagtgcta
tttatgttaacaccatcagtccagcaacatgttgatactcttcatgaacgagtcctacac
catccattagctgtacatcttccagtggctttaatgaagttctatacattggtggaatct
actggcgctagcagtgaattttatgacaaattcaccatccgttatcacatcagcatcatt
ttcaagagcttttggaatgataggcagcatagacaagctgttatcacagaatccaactca
gggaaggagtttgtgaagtttgttaacctcctcatgaacgataccacctttttgttagat
gaatcattagatgccctaaagcgaattcatgaagtgcaagaggaaatggagagaggaact
tggtcaaaacagacaagagaacaacagcagagtcggcagagattactggctactgatgaa
agacagtgcagatcatacctaactttagcaagagaaactgtcgacatgatgcattactta
actcaagaagtacctgttccattcttaaggcctgagctgtgtgacagactggctgcaatg
ctcaattttaatcttgcccaactctgtggtgaaaagtgtggaaatttgaaagtaagacaa
gctgacaaatatgggtgggaaccccgaaaattgttggaacaaatagtagacatctattta
catttagattcagataaatttgctgaagctattgctactgatgagagatcattcaagagg
gaactttttgaaactgcagcctcaaagttggagcgtgctgtaattaaaagcagctctgag
gttgccaaatgttcgtttagtagtattggccaaaaagcattcagcgttcagcaagctaat
cagaagaaagatgaggattatagtgatgccccagatcattttatggaccctttaatgcaa
acattaatggaagatccagttgaactaccgtccggagttgtgatggaccggcccacaatt
gttcggcatttacttaacgaccccaccgatccatttaccaggcaacctctttctgaagag
cagcttaaaccagcggaggccctgaaaaaagaaattacagactggattgcagctaaatcc
aatcccaagagcacatcttga
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