Macrobrachium nipponense (oriental river prawn): 135210382
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Entry
135210382 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04120
Ubiquitin mediated proteolysis
mnz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135210382
04120 Ubiquitin mediated proteolysis
135210382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnz04121
]
135210382
Enzymes [BR:
mnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135210382
Ubiquitin system [BR:
mnz04121
]
Ubiquitin ligases (E3)
U-box type E3
135210382
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
135210382
NCBI-ProteinID:
XP_064099359
LinkDB
All DBs
Position
39:complement(21654327..21796440)
Genome browser
AA seq
1108 aa
AA seq
DB search
MGDQIDQDEVRKKRLARLTAGASNSSTNSEASQISAPTSPGIQLPTSPNATSLLPSPHKR
QPPPSPLDITPCKKGLEEPMEVETKAETPTSLETGHYGSDNKRPRSVSTSEVTEELVLST
LSNVLQAKWQDVTTTCPITVQVLSAAKKAEITSQVLMEVTMRVCAGENIEGLVDPNYTSD
SPELSASPTGIKNTSEASMLTEMMYRPETTALQYLLQTFARAKLKRKAHKGRSNSPPLST
VLLDVRRQCVAHAALLLSGCLTNSLAPLPSLLLHPLLTDSLPRGFLCDIIQHTYENGDLF
NKVFGPLLLGLSTTMRSCSVTSSLYIKVLESLGLVIDMRLNNATNSNHRPICSLLTSMSN
WCSSTEHPAAGREMLFTTLFGPFLGLSLFAEDDPKVVEKFIKNVSNRTIPDGLQDLPKNW
TMLRTTILHKLFRSMLLNPSSREPVLSFLAKLIRCNERRAQIHVEERLVAGDGPMINLLS
VLQQLCFKVKLDKVDPYYLIHPESLVDVSKDSRLSMTQEEVDEWVRKQRSEGCSKFQPVT
FHSQCWFLTLHAHHLGVLPVMRKYTRRLRAIRDLQKMVEEIESTESQWANLPVASRQREL
LKKWKLQLKKLNKSRICADAGLLDENLLERCMHHYSGAAQVILRILTGDQNTLAPLGVTL
ADTANFLPLPSELPELFAALPESGEAIWVMYSELSLQFLFLNRYVPKVPINNLGDPIITM
TIVLLCSPSHIKNPYLTAKFVEVLFMLTPSSQQHVDTLHERVLHHPLAVHLPVALMKFYT
LVESTGASSEFYDKFTIRYHISIIFKSFWNDRQHRQAVITESNSGKEFVKFVNLLMNDTT
FLLDESLDALKRIHEVQEEMERGTWSKQTREQQQSRQRLLATDERQCRSYLTLARETVDM
MHYLTQEVPVPFLRPELCDRLAAMLNFNLAQLCGEKCGNLKVRQADKYGWEPXKIVEQIV
DIYLHLDSDKFAEAIATDERSFKRELFETAASKLERAVIKSSSEVAKFRSIGQKAFSVQQ
ANQKKDEDYSDAPDHFMDPLMQTLMEDPVELPSGVVMDRPTIVRHLLNDPTDPFTRQPLS
EEQLKPAEALKKEITDWIAAKSNPKSTS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagatagatcaagatgaggttcggaagaagcgtttggcccgtcttacagcg
ggggccagcaatagtagtactaacagtgaggcatctcagatttctgcccccacctcacca
ggcatacagttgccaacgtctcctaatgcaacatcactgctgccttctccacataaaaga
caacctccaccttcaccactagatattactccttgtaaaaagggtttagaagaacctatg
gaagtagaaaccaaggctgaaactccaaccagcttggagacaggtcattatggcagcgac
aacaaacgtcccaggagtgtcagtacaagtgaggtaacagaagagttagtgctttcaacg
ttatcaaatgtgcttcaggccaaatggcaagatgtcactactacttgcccgatcacagta
caagttttatcagccgctaaaaaagctgagatcacatcccaggtgctgatggaggtcact
atgcgcgtgtgtgcaggggagaacatagaagggttggtggatccaaactatacatctgat
tcaccagagctcagtgcctcacccacaggtattaagaacacaagtgaagcttctatgcta
acagaaatgatgtatcgtccagagacaacagctctacagtatcttcttcagacatttgct
agagcaaagctgaagagaaaagcccacaaaggtagaagcaattctcctcccttgtcaaca
gttcttttggatgtccggcgacagtgtgtagcgcatgctgcattgcttttatcaggatgc
cttacaaattctttagctcctcttccatccttgttgcttcacccattgctgactgatagt
ctgcctaggggattcctctgtgatatcattcaacatacctatgaaaatggggacttattc
aataaagtgtttggacctttacttttggggctgagcacaacaatgaggagttgcagtgta
acttcgtccttgtacataaaagttctagagtctttaggacttgttattgatatgaggcta
aataatgctaccaactccaaccaccgacctatatgtagcctattgacctcaatgagtaac
tggtgttcaagtactgaacatccagcagctggtcgtgagatgttgttcactactctcttt
gggccattcttaggtttatcattgtttgctgaagatgatcccaaagtagtggagaaattc
atcaagaacgttagtaacagaactattccggatgggttacaggatttgccaaagaattgg
accatgcttcgcactaccatcctgcacaaattgtttcgtagcatgttactgaatccctca
tcacgtgaaccagtcctgtccttccttgcgaagttgattcggtgcaatgaacgccgggca
cagatccatgttgaagaaagacttgtggccggagatggccctatgatcaatttgctttca
gttttacaacaactttgttttaaggtgaaattggacaaagtggatccttattatttaata
catccagaatcactcgtagatgtgagtaaagattcccggctctctatgactcaagaagag
gtcgacgagtgggtgcgaaaacagcgatctgaagggtgctccaaattccaaccagtaaca
tttcatagtcagtgttggttcttaacacttcatgcccatcatttaggtgtcttacccgtt
atgcggaagtatacgagacgattaagagcgatacgggaccttcaaaagatggtggaagaa
atagaaagtacagaatctcagtgggccaatctccctgtagcttcaagacaacgagagttg
ttaaaaaaatggaaactgcagctaaagaagctaaataaatcccgaatctgtgccgatgct
ggcctgttagatgagaacctgttggaaagatgtatgcatcactactctggagcagctcag
gtaatattacgtatactcacgggcgatcagaacactttggcacctctgggggtgacgctt
gctgatactgccaacttcctgcctcttccatctgaattgcccgaactctttgctgcactg
cctgagtcgggagaagccatctgggtaatgtattcagagttaagcttacaatttttattc
ctgaacagatacgtccccaaggttcccatcaataatcttggggatcccatcatcaccatg
actatcgtcctgttgtgctctccgtcacacataaagaacccatatctcactgccaaattt
gttgaagtgctatttatgttaaccccatcatcccagcaacatgttgatactcttcatgaa
cgagtcctacaccatccattagctgtacatcttccagtggctttaatgaagttctataca
ttggtggaatctactggcgctagcagtgaattttatgacaaattcaccatccgttatcac
atcagcatcattttcaagagcttttggaatgataggcagcatagacaagctgttatcaca
gaatccaactcagggaaggagtttgtgaagtttgttaacctcctcatgaacgataccacc
tttttgttagatgaatcattagatgccctaaagcgaattcatgaagtgcaagaggaaatg
gagagaggaacttggtcaaaacagacaagagaacaacagcagagtcggcagagattactg
gctactgatgaaagacagtgcagatcatacctaactttagcaagagaaactgtcgacatg
atgcattacttaactcaagaagtacctgttccattcttaaggcctgagctgtgtgacaga
ctggctgcaatgctcaattttaatcttgcccaactctgtggtgaaaagtgtggaaatttg
aaagtaagacaagctgacaaatatgggtgggaacccnngaaaattgttgaacaaatagta
gacatctatttacatttagattcagataaatttgctgaagctattgctactgatgagaga
tcattcaagagggaactttttgaaactgcagcctcaaagttggagcgtgctgtaattaaa
agcagctctgaggttgccaaatttcgtagtattggccaaaaagcattcagcgttcagcaa
gctaatcagaagaaagatgaggattatagtgatgccccagatcattttatggacccttta
atgcaaacattaatggaagatccagttgaactaccgtccggagttgtgatggaccggccc
acaattgttcggcatttacttaacgaccccaccgatccatttaccaggcaacctctttct
gaagagcagcttaaaccagcggaggccctgaaaaaagaaattacagactggattgcagct
aaatccaatcccaagagcacatcttga
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