Macrobrachium nipponense (oriental river prawn): 135210461
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Entry
135210461 CDS
T09903
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135210461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnz04121
]
135210461
Enzymes [BR:
mnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
135210461
Ubiquitin system [BR:
mnz04121
]
Ubiquitin ligases (E3)
HECT type E3
135210461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
Motif
Other DBs
NCBI-GeneID:
135210461
NCBI-ProteinID:
XP_064099425
LinkDB
All DBs
Position
39:complement(51278957..51435617)
Genome browser
AA seq
1792 aa
AA seq
DB search
MVDTRVHPHHHLDLPRHLLMVLVPLVEVKAQPAQLVCLRPPPQPPPRSCCSSTSTTSGLL
PTASLATLGAIGGGSSSGASGGGLASSIGGIMGAPTDSESEEGEMGRLEALLASRGLPPS
LFGALGPRMQHILHRSVSSSISSKAQQLLIGLQATGDESEQLQAVIEMCQLLVMGNEDTL
AGFPIKQVTPALINLLNMEHNFDMMNHACRALTYMMEALPRSSAVVVDAVPVFLEKLQVI
QCMDVAEQSLTALDMLSRKHSKAILQAHGVSACLMYIDFFSTGAQRAALSITANCCQNLT
ADEFHFIADSLTLLSSRLTSQGDKKCVESVCLAYSRLVDCFQNDPNRLQEIAGHGLLSNI
QQLLVMSPPVLSSGTFIMVIRMLSLMCNNCPELAVHLLKNNIAHTLCYLLTNSTDPPGEQ
IELVSRTPQELYEITCLIGELMPMLPSDGIFAIDVALIRPAGSAQDMVMWQWQDDRASWQ
NYSTSDSRIIELSHQSGEDEISLCIQGRAYTIDFHSMQQINDNSGTMRSVQRRMMPVGMS
GTPTVATQATDARAKCLQEDSELASNLIRSLFSLLYEVYSSSAGPAVRYKCLRALLRMVQ
FSSPELLQQVLKSQSVSSHLATMLSSHDLKIIVGAIQMTEILMQKLPEIFAIYFRREGVM
HQIKRLCDPDATLGTPSAKWSSPELSVGPGRGSTQSSASPLLTGRPFNGNCLDSTPSLPA
PPTQDDEKLQSPSQLRLADVLKRKRTARIRSGTWRKSRQEESSSSSSFSEFFMKNAGLSG
GKDSWRGMGSRTKIVSGNNSTNSSGGGSGKVSFLATLNPSRWGRCNSTSSTPSHEPHTGK
DKLLGNNSSNSTNSSNKEVVRVWVREQAQRLNQQYFTTDLQGVTHPALSVLNRLIAAIQQ
LEQEPNNAVEALREISRIVMESDISPFEVIHSGLVRCLLTYLTASDNSTLSLTHDGLLLA
AIGGINNSTENGSLTSVSISTPRENRLRNFLHVFLGCPLNPLSLGSVDTSHIALFSALVT
KLNGCVNQLEQFPVKVHDLPGTALSGLGRGGSTSAIKFFNTHQLKCNLQRHPDCTRLRQW
RGGPVKVDPLALVQAIERYLVIRGYGRLRDEDDDNSDDDNSDEDIDDTLAAVSVNQSSSS
HKLQFVMGDHVLPYNMTVYQAIRQFSSPSDASASEADTDTETPISHSAIWLQTHTIYYRP
VQEEEQTRSSSGRKGKAGGSKPSPKKKADTLVGDGSIVGGNNSVLDQYLTANLPASVTVS
DPSLEVLALLRVLHALNRHYGSLYPPAAYPSPLPITEFTNLKLTAKANRQLQDPLVIMTG
NLPPWLPQIAYVCPFLFPFETRQLLFYAVSFDRDRALQRLMDSSPELNSVDSSERVTPRL
ERRKRTVSRDDILKQAEAVISDLASSRAMLEIQYENEVGTGLGPTLEFYALVSRELQKAD
LELWRGETVTVEERTEDNPGKSVKYVNASNGLYPLPVPRNMKSAHMTKLRNKFRFLGKFM
AKAVMDSRMLDLGLHPCVYKWLLNEEWSLGLGDVASLDPAVGQTLDRLHSTVLHKRRVIA
QAEQEGISGSELQARLDALTVDGVSVEDLALTFTLPGYPNIEFRKGGSDIAVTINNLDQY
VQLVIEWLVREGVRRQMEALREGFECVFPLTQLHVFYPEELEQLFCGSSDSSQWDMKQLA
ECCRPDHGYTHNSKAVQFLLQILSEYNPAQQRSFLQFVTGSPRLPVGGFRSLTPALTIVR
KTCEAGENPDDFLPSVMTCVNYLKLPDYSSIEIMRAKMGIAAREGQHSFHLS
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggtggacacgagggttcatccacatcatcatctggacctccccaggcatctcctcatg
gtgcttgttccactggtggaggtcaaggcacagccagcgcagctggtttgccttcgacca
ccaccacagcctccgccacgctcatgctgctcatctacctccaccacatcaggactgctc
cctactgcttcacttgctactcttggagccattggagggggaagcagtagtggtgccagt
ggcggtggtttggcaagcagtattggaggcattatgggtgcgccaacagatagtgaaagc
gaggagggagaaatggggcggttagaggcactgctggcgtcgcgtggacttcctcctagt
ctctttggggcattggggccacgcatgcagcacattctacaccgttcagtttcgtcctct
attagttccaaagctcagcagcttttgattgggctacaagctacaggagatgaaagtgag
caactgcaggcagttattgaaatgtgtcagctccttgtaatgggtaatgaagatacgctt
gctggtttccccatcaaacaagtcactcctgcccttatcaacttactgaacatggagcac
aattttgacatgatgaatcatgcctgccgagcactaacttacatgatggaagccttacct
cggtcatctgcagtcgtagtggatgcagtacctgtctttttagagaagttacaggtcatt
cagtgtatggatgtagctgaacagtctttgacagctctagacatgttatctcgaaaacat
tcgaaggccatattacaggctcatggagtgtctgcgtgcttaatgtatatagacttcttt
tctactggagcacagcgggcagcacttagcataaccgcaaattgttgtcagaacctcact
gctgatgaattccattttattgctgattccttgacattgttatcctctaggctgacttca
cagggtgacaaaaaatgcgtagaaagcgtgtgtttagcctatagcaggttggttgattgt
ttccagaatgatcccaatcgtttacaagagatagctggtcacggtttattatcaaacata
caacaattgctggtcatgtcccctcctgtattgagtagtggaacgttcatcatggtgatt
cgaatgctttcactgatgtgtaacaactgtccagaattggctgtccatttgctaaaaaac
aatatagcccatacactttgttacctccttacaaattcaacagacccaccaggagaacaa
attgagctggtttctcgtacccctcaagaactttatgaaatcacttgtctgattggagaa
cttatgcctatgcttccatctgacggtatttttgcaattgacgtggccttgataagacct
gcagggtctgcccaagatatggttatgtggcagtggcaagatgatagagcttcctggcag
aactactctactagtgattctagaatcattgagctttctcatcagtcaggggaagatgaa
attagcctttgtattcagggccgtgcctacactattgacttccactccatgcagcaaatc
aacgataactcggggactatgaggtctgttcaaagacggatgatgccggttgggatgtcg
ggaactcctacagtggctacacaggccactgatgctcgtgcgaagtgcctgcaagaagat
tcagaattggcttccaatctgattcgttcattgtttagcttgctatatgaggtatatagt
tcatcggctggtcctgcagtacggtacaaatgtttacgggcattgttgaggatggttcag
ttttccagtccagagctattgcaacaagtccttaaaagccagagtgtctcttcacacctg
gctactatgttgtcatcacacgacctaaagatcatagtaggagcaatacaaatgacagaa
atcctgatgcagaagttgcctgaaatatttgccatttatttccgccgtgagggggtgatg
caccaaatcaaacggttgtgtgacccagatgcaacattaggaacgccatctgcaaagtgg
agcagtcctgaactctctgttgggcctggacgtggcagtactcaaagttctgccagtcca
ttactaactggaaggccatttaatgggaattgtctggattctactccttctcttccagca
ccacctacacaggatgatgagaaacttcaaagcccatcacaattacgacttgcagacgta
ctcaaacgaaagcgcacggcacgaatacgttctggtacgtggagaaaaagtagacaagaa
gaatcctcatcgtcatcatcatttagcgagttttttatgaaaaatgcaggcctaagcgga
ggcaaggacagctggagaggcatgggtagtcggaccaagattgttagtgggaacaattcc
acgaactcgagtggagggggcagtggcaaggtctcctttctggccaccttaaacccttca
cgctggggaaggtgcaattctacctcatctactccctcacatgagccccacacgggaaag
gataagttgttgggaaataactccagtaatagtactaatagcagtaacaaggaagtggtt
agagtgtgggtgagagagcaggcacagagactcaatcaacaatacttcacaacagaccta
caaggggtaacccacccagccctaagtgttctaaacagacttatagctgcaattcagcag
ctagagcaagagcccaataatgctgtggaggcactgagggaaatcagtagaatagtcatg
gagagtgatatcagcccctttgaagtcattcattctgggttggttcgttgcctcctaacc
tacctcactgcctcggacaactcaacgttgtccttaacccatgatggactgctcttggca
gctatagggggaataaataactccacagagaatgggagcctcacctctgttagtataagt
acacctcgagaaaacagactcaggaatttccttcatgtcttccttggatgtcctttgaat
ccattaagtttgggaagtgtggacaccagtcacattgcgttgtttagtgctcttgtgacg
aagttgaatggatgtgttaatcagctagaacaatttccagtgaaggtccacgatttacct
ggcactgctctctctggtttaggccgagggggctcaacatctgccatcaagttctttaat
acccatcagctgaagtgtaatttacagaggcatccagattgcaccaggcttagacaatgg
cggggaggcccagttaaggttgaccctcttgctttggttcaagccattgaacgttatctc
gtcattaggggttatggtcgactcagggatgaagatgacgacaactctgatgatgataac
tcggatgaagatatagatgatacactggctgctgtctctgtcaaccagagttcctcaagt
cacaagctgcagtttgtcatgggtgaccatgttttgccatacaacatgacagtttaccaa
gcgatcagacaattctcctcaccatcagatgcaagtgcatcagaagctgacacagacact
gaaacacccatctctcattcagcaatctggcttcaaactcataccatatactataggcct
gtacaagaagaggagcaaacccgcagctctagtggaagaaaggggaaggctgggggttca
aaaccaagtcctaaaaagaaagcagacactttagttggagatggtagtattgtaggaggg
aacaatagtgttctggaccagtacctgactgctaacctgcctgccagtgtaactgtgagt
gaccctagtttggaggttctagctcttttgcgagtcttgcacgcactgaacaggcattac
ggatctctctatcctccggctgcatacccgtcccctctgcctattacagagttcacaaat
ttgaagctaactgccaaagccaataggcagttgcaagatccactggtcattatgacagga
aacttgccaccgtggttgcctcaaattgcctacgtttgtccgttcctcttcccatttgaa
actcgccagttgctcttctatgcagtctcttttgaccgggatcgagctttacaacgacta
atggattcctcgcccgagcttaactccgtcgacagtagtgaacgggtcaccccaagatta
gaaagacgtaaaagaacagtttctcgtgatgacattttgaagcaggccgaggctgtgatt
agtgatttagcttcttcgcgagccatgctagaaattcagtacgagaatgaagtgggaact
ggtctaggtcctactttagaattttatgctctagtgtcaagagaacttcaaaaggcagac
cttgagttgtggcgtggtgaaacagtgactgtagaggaaagaactgaagacaatcctggg
aaatcggtgaaatatgtcaatgccagcaatggcttatacccattgcctgtgcctcgaaat
atgaaaagtgcacatatgaccaaacttagaaacaaattcaggtttttggggaaattcatg
gcaaaagctgtcatggattcaagaatgcttgaccttggtttgcacccgtgtgtgtacaaa
tggctgttaaatgaggagtggtcattaggtcttggagatgtggcctctctggatccagct
gtaggccaaactttagaccgtttgcactctactgtcttgcataaaagacgtgttattgcg
caagcagaacaggaaggaatctcaggatctgagcttcaggctcgtttggatgctcttact
gtggatggtgttagtgtggaggatttggcattaacgttcaccttgcctggctatcctaat
attgagttcaggaaaggtggttccgatatagcagttactataaataatcttgatcaatat
gtacagttggtaatagagtggcttgtccgtgaaggggttaggaggcaaatggaagccctc
cgtgagggctttgaatgtgtgttccctttaactcagctccatgtgttctacccggaagaa
ctggaacagttgttctgtggatcatcagattcttcacagtgggacatgaagcagcttgcc
gagtgttgtcgacctgatcacggatacacacacaattcaaaagctgtgcaatttttactg
cagatcctctcagaatacaatcctgctcaacagaggtcattcttgcagtttgtcacgggt
tctccaaggctacctgttggaggtttcaggagtcttacaccagctcttacaattgtcaga
aaaacatgtgaagctggagaaaaccctgatgacttcctcccatctgtgatgacttgcgtg
aattacctaaagttacctgactattctagtatcgagattatgcgtgccaaaatgggaatt
gctgccagagaaggacagcatagcttccacctttcctaa
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