Macrobrachium nipponense (oriental river prawn): 135210814
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Entry
135210814 CDS
T09903
Name
(RefSeq) gastrula zinc finger protein XlCGF8.2DB-like
KO
K09191
general transcription factor IIIA
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnz03000
]
135210814
03021 Transcription machinery [BR:
mnz03021
]
135210814
Transcription factors [BR:
mnz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
135210814
Transcription machinery [BR:
mnz03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
135210814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_15
zf-C2HE
C2CH-3rd_BIRD-IDD
zf-met
zf-C2H2_16
zf-C2H2_11
zf-CHY
Zn_ribbon_8
C1_4
TFIIIA_zf-C2H2
UPF0167
C2H2-zf_KIN17
DUF5830
Motif
Other DBs
NCBI-GeneID:
135210814
NCBI-ProteinID:
XP_064099750
LinkDB
All DBs
Position
4:25389085..25509275
Genome browser
AA seq
385 aa
AA seq
DB search
MEAKDPLSLYPVKQENENLKDNPNGVTDYNDGALSLHTPVKVEVKADIEDYEYIVTDDND
GSLYLDTSVKFEVKADPEHEEFTVAECNDGSSYLGPSNEVEVKAGPEGYTSDEIAITDEE
FNKKIIVEVGRYKKEKKFTCTECGRGFSQSHKLKVHMRTHTGEKPYTCAECQRSFSVLYS
LKAHMRTHTGEKPFNCTECGRTFSQPRGLRVHMSTHKNESRFLCNECGKSFYDARVLKVH
MRSHTGERPYPCPICRRSFMYSGNRKAHMRTHTGEKPYTCDECQRSFSYLEVLKKHMRTH
TGEKPYACTECPRTFAQLGGLSGHMKTHTGEKPFTCTECQSSFASSSQLKRHTRIHTREK
PYTCSECHVSYSDSRSIKAHMKKHT
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaaggacccattatcattatatcctgtcaagcaggaaaatgaaaatcttaag
gataacccaaatggagttacagattataatgatggtgcattgtctttacacacaccagtt
aaagttgaggtcaaggctgacatagaagattatgaatatatagtcacagatgataatgat
ggttcattgtatttagacacttcagttaaattcgaggtcaaggctgacccagaacatgag
gagtttacagttgcagaatgtaatgatggctcatcgtatttgggtccatcaaatgaggtt
gaggtcaaggctggcccagaaggttatacatctgatgaaattgcaattactgatgaagaa
tttaataagaaaattattgtggaagttggtagatacaaaaaagagaaaaagttcacttgt
accgaatgtggaaggggcttttcacagtcacataaactcaaagtgcacatgagaactcac
actggagagaaaccttacacatgtgctgaatgtcagaggagcttttctgtactatatagt
ctcaaagcacatatgagaactcatacaggagagaagccgtttaactgtactgaatgtgga
agaacattttcgcaaccacgtggtcttagagtccacatgagcactcacaaaaatgagagt
cgattcctttgcaatgaatgcgggaaaagtttttacgatgcaagagttctgaaagttcac
atgaggtctcacacgggggagagaccttatccttgccctatatgtcggcgtagctttatg
tattcaggtaatcgcaaagcacacatgaggactcatacaggagagaaaccatacacctgt
gatgagtgtcagcgtagcttttcttacctagaagttttgaaaaaacacatgaggactcat
acgggagagaagccgtatgcttgcactgaatgtccaaggacttttgcccagttaggtggt
ctcagtgggcacatgaaaactcatactggagaaaagccatttacttgcacagaatgtcaa
agtagttttgcaagctcaagtcaactgaaaaggcatacaagaattcatactagagagaag
ccgtacacgtgcagtgaatgtcacgtgagttattctgattcacgtagtataaaagctcac
atgaaaaagcatacgtaa
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