Macrobrachium nipponense (oriental river prawn): 135210980
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Entry
135210980 CDS
T09903
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnz03021
]
135210980
Transcription machinery [BR:
mnz03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
135210980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
DUF7501
Motif
Other DBs
NCBI-GeneID:
135210980
NCBI-ProteinID:
XP_064100044
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Position
4:85637589..85788060
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AA seq
756 aa
AA seq
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MTHITILREEADPKESFTLNLCGNCGYGCHPSSRNYHCPLCHPSKFKAKPSEDLVKKHLN
DHFTIEKKVVHIKGYKITICSLPCSGKSSLEGQNHLHCPFCPELTKGRRAFISHIQRHSS
SPSSSCKKEKLPSRQRTSRNFNAYDEICRLNKSLNDSKVNIVEDPSSQNVTLDDISSTED
VHQVISEYKKTGISKGFERIFGLLSKEGDFTAKMTWIIGMTECVKLLDRKADKIVITFMK
MSLFSCQELANATYNFIGTLLAQHNYYAHHVLKILFQHLVPQIEEEHQDDMLVTGGCISK
EEAAVYNRVISAIIMINSDIPMTQENLLILARKSVPYFQVHVHKHAVYTRNLLLLASYLP
KLRLSVLEVIIANMITIDVHAPRSELAEEDGDEDILDSSDDEDVFDMEVEDSEGKQRGAA
NKSIDGNCPLDSCQVPRPMTHKAGNTLDVLMSIMLQYVHDVSHGVHKPKTPEHLREIEME
AHEREELDCCRPGILGSPDFDPKRMGRCECDGHRQDVDSVKKLYNDLKDVFSNLILRTHA
SSHVQFLLFYIISLRPGLLPFFADFLINNKFKDINTSVCIRKNAMAYVGSLLARGKHITL
LDVHACLESIRDWCNEYLDAQERLPERNYEDLMLHGGFYSACQTMFYVFTFRYKQYTESK
KALSLARSLNFDRIIHSKLNPLNVCTPAVVNNFAAVAHHFQVVYCYAVIENNKRLQIPVA
RIEDYLQPVTVLESFFPFDPYLLNRLVMPREVFLEF
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgactcacatcacaatattgagagaagaagcagacccaaaggaatcgtttacgttaaat
ttatgtggtaattgtggttatggctgtcatccttcaagcaggaattaccattgtcctctt
tgccatccatcaaaattcaaggcaaagccatcagaggatttggttaaaaaacatttaaat
gaccattttactattgaaaaaaaagttgttcacattaaaggttataagattacaatttgc
tctctgccttgttcaggcaaaagttctttagaggggcagaaccaccttcattgtcctttc
tgtccagagctcaccaaaggaagaagagcgtttatttcccatattcagagacattcctct
tcaccatccagttcttgcaaaaaagaaaaactacccagtcgtcaaagaaccagtagaaat
ttcaatgcatatgatgaaatttgcagattaaataaatcactcaatgattcaaaagtaaat
attgtggaagatccttcttcacaaaatgtcacgcttgatgatatatccagtacggaagat
gttcaccaggttatcagtgaatataaaaagactggtatctccaaaggttttgagcggata
tttggattgctttccaaggagggggattttacagcaaagatgacctggataattggaatg
acagaatgtgtaaaattgctcgataggaaagcagataaaattgttataacatttatgaaa
atgtccttgttctcatgtcaagaactggctaatgccacctacaatttcattggtactcta
cttgcccagcacaattattatgcacatcatgttctgaagatcctgttccaacacttagta
ccacaaattgaagaagagcatcaagatgacatgcttgttactggtggatgtattagcaaa
gaggaagctgctgtttacaaccgagttatttctgccatcataatgataaattctgacatt
ccaatgactcaggagaacttgttaatcctagctaggaagagtgtaccttatttccaagtt
catgtccacaaacatgcagtctacacacgcaatcttctcctcctcgccagttatttacca
aaattacgtctttctgtcctggaagtcattattgccaatatgatcaccattgatgttcat
gcaccaaggtcggaactggcagaagaagatggtgatgaagacatattggattcaagtgat
gatgaagatgtatttgatatggaagtggaagattctgaaggtaagcaacgaggtgctgca
aataaatcaattgatggcaattgtccacttgatagttgtcaagttccaaggccaatgaca
cataaagcgggcaacacactggatgttctgatgtctataatgttgcagtatgttcatgat
gtctcacatggtgttcataaacctaagactcctgaacaccttcgagaaattgaaatggaa
gctcatgagagagaggaattagactgttgtagacctggaattttaggttctccagatttt
gatccaaagcgaatgggaagatgtgaatgtgatggacacagacaagatgttgattctgtc
aagaagttgtacaacgaccttaaagatgttttttcaaatcttatattgcgaacccatgct
tcctcacatgtgcagtttctcttattttatattatttcacttcgacccggacttttacca
ttttttgcagattttctcattaataacaagtttaaagacatcaatacctcagtatgtata
cggaagaatgctatggcctacgttggtagtctgcttgctagaggaaagcacattactctt
ctggatgttcatgcgtgtttagaatctataagggattggtgcaatgaataccttgatgct
caggaaagattgccagaacggaattatgaggacttgatgcttcatgggggcttttattct
gcatgccaaacaatgttttatgttttcacctttagatataaacagtataccgaaagtaaa
aaggcactgtctctcgcaagaagcctcaactttgatagaattattcatagtaaattaaat
cccttgaatgtttgcactccagccgttgtaaacaactttgcagcagtggctcaccatttt
caggttgtctactgttatgctgttattgaaaataacaaacgtcttcaaatcccagttgct
aggattgaagactacttacaaccagtcacagtacttgaatcgtttttcccattcgaccca
tacttactgaacaggttagtaatgcccagagaggtttttcttgaattttaa
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