Macrobrachium nipponense (oriental river prawn): 135210993
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Entry
135210993 CDS
T09903
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135210993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnz03041
]
135210993
Spliceosome [BR:
mnz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
135210993
Complex C
U4/U6.U5 tri-SnRNP related factors
135210993
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PBP_like_2
Motif
Other DBs
NCBI-GeneID:
135210993
NCBI-ProteinID:
XP_064100070
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Position
4:complement(88028406..88290007)
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AA seq
400 aa
AA seq
DB search
MKAGAYEYEEDEKVIANKKSNGLPIWGNEKSMNLNPLILTNIQSSQYFKVNLYQLKTYHE
VIDEIYYNVSHLEPWEKGSRKTSGQTGMCGGVRGVGAGGIVSTAFCILYKLYTLRLSRKQ
VTGLLNHGDSPYIRGLGFMYIRYTQPPADLWDWFEPYIDDEEEIDVRAGGGQTTTIGQVV
RHMLSKLDWYSTLFPRIPVPIQKDIEKKLAERIASKPQNPTVGAYSAQGKNERYGQGGDE
QANRPDREYASRDHEYEKDRQKNRERDYDRDRGREKEKSHDKERDREPERKRERSGERSR
DYPRERNGDYDRHRDRYRERDREHDRHRNRDKDRKKSRSRSRERKHRHHGDRHIDDRSHR
DFADLLEREKHRIKKERKRDTSRERHHRSRSHDRDRKHRY
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctggcgcttatgagtatgaagaagatgagaaggttattgccaacaagaaaagc
aatggtttgccgatatgggggaatgagaagtccatgaatcttaatcctctaatattaaca
aatattcagtcatcacagtatttcaaagtgaatttatatcagctgaagacataccatgaa
gtcattgatgagatttactataatgtgagtcatttggaaccttgggaaaaagggagtcgc
aaaacttcagggcagactggcatgtgtggtggggtcagaggtgttggtgcaggaggtatt
gtgtctacagcattttgtattttgtataagctgtatacacttcgtttatcacgcaagcaa
gtgactggcctccttaatcatggggattctccatatattcgtggtttaggatttatgtat
atcaggtacactcaaccaccagccgatttgtgggattggtttgagccctacatagatgat
gaggaggaaatagatgtacgagctggaggagggcagacaaccaccattggtcaagtagtg
cgacacatgctgtccaagttggactggtactccacacttttcccacgcatccctgtacct
attcagaaagatatagagaagaagctggcagagcgcattgccagtaaaccacagaaccct
actgtgggagcatattcagcacagggaaaaaatgagcggtatggtcaaggtggtgatgaa
caagcaaaccgaccagatcgggaatatgcatctagagaccatgaatatgaaaaagatcgc
cagaaaaatagagaacgagattatgatcgggatagagggagagagaaagagaaaagccac
gataaagaaagggacagggaacccgaaagaaagcgagaaaggtcaggtgagcgatccaga
gattatcccagggaacggaatggagattatgaccgccaccgagaccgctacagggaacga
gacagggaacatgatcgccatagaaacagggacaaggacaggaagaaaagtagaagtcga
agccgtgaaaggaagcatcgccaccatggcgatagacatattgatgacagaagccaccga
gactttgccgatttactggaacgtgagaaacaccgtattaagaaggaaagaaaacgagat
accagccgggaacgacaccatcggagccgttctcatgaccgagatcgaaagcacaggtat
taa
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