Macrobrachium nipponense (oriental river prawn): 135211323
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Entry
135211323 CDS
T09903
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03030
DNA replication
mnz03410
Base excision repair
mnz03420
Nucleotide excision repair
mnz03430
Mismatch repair
mnz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135211323
03410 Base excision repair
135211323
03420 Nucleotide excision repair
135211323
03430 Mismatch repair
135211323
03440 Homologous recombination
135211323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnz03032
]
135211323
03400 DNA repair and recombination proteins [BR:
mnz03400
]
135211323
Enzymes [BR:
mnz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
135211323
DNA replication proteins [BR:
mnz03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
135211323
DNA repair and recombination proteins [BR:
mnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
135211323
MMR (mismatch excision repair)
DNA polymerase delta complex
135211323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
POL3_N
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
135211323
NCBI-ProteinID:
XP_064100710
LinkDB
All DBs
Position
4:complement(28915065..28917899)
Genome browser
AA seq
924 aa
AA seq
DB search
MFGVDVSGNSVCCHIHGFYPYFYMNYPEDKLLLLNNIDSFKKLINEKLAQKLYFLKNITD
FIISITIVNKRTIYGYNSHNEGLKRFLKITIALPKLIHEVKNILELELKGENEDEERKNE
FYEANIDFILRFMIDVNLSGCSWIEIPSQSCIFRDSNNEKESTCQIEIDVLWTNIMPHDP
VETKWASIGPLTILSFDIECANRRGIFPTPDNDPIIQIGNVIAKHDKLEMKKVIFVLGKN
CDPIEDAKIFLFHSEQEMLKAWSRFVQKVVDPDIITGYNINNFDFPYLIGRAKHLNIDDQ
FYLSRIKNVKSFITSWGFESKQVGKIVNKCINVEGRCIMDVLSVIKREYKLRSYSLNAVS
QYFLNEQKDDIHHTEISELHRTSAQTRRKLAVYCLKDALLPLKLIDKLMLSINYIEMARV
TGVPLTFILTRGQQIKIMSQLLRNCALENFIVPSCEGGLKGCMGYQGATVIEPAKGFYNS
PITTLDFCSLYPTIIMAHNLCYTTLLLTNNDKTILASTDNYTKTPTNNYFVKPHIRKGLL
PRILENLLMARKKAKDELKRETDPLRKKVLDGRQLALKISANSVYGLFTGAQMSGKLPCI
EISQSVTAFGREMIMFTKNKIEEKYVNAKVIYGDTDSVMINFGVDTIQEAIVLGQEAAAF
VTNFFMTPIKLEFEKVYFPYLLINKKRYAGLYYTRPENFDRIDCKGIETIRRDNCRFTAE
LISEVLNIILIQRDTEKAITLVKNTISELLHDRIDISKLIITKELTKTKKEYKAKQAHVE
LAYKMKLRESSTAPQLGDRVPYVIIKLDNNEKKNTPLYQKAESPEYVVKHNLQLDYNYYL
KNQIRNPLLRIFEPILGSNVEKILLSGDHMISKTGTVLNILSKPRIMCIKCNAKYIQSNN
KTLICIHCRQKKKMDQKTICSFLK
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgtagatgtctcgggtaattcggtatgttgtcatattcatggattttatccc
tatttttatatgaattatccagaagataaattattattattaaataatattgattcattt
aagaaactaataaacgaaaaacttgcccaaaaattatattttttaaaaaatattacggat
tttattatttctataacaatagtaaataaaagaactatttatgggtataatagtcataat
gaaggtctaaaacgttttttaaaaataacgatagcattgcccaaattaattcacgaagtt
aagaatattttagaattagaattgaaaggagaaaacgaagatgaagaaagaaaaaatgag
ttttacgaagccaatattgattttatattgcgttttatgattgatgttaatttatcgggg
tgttcttggatagaaataccgtcccaatcttgtatttttagggatagcaacaacgaaaag
gaatccacatgccaaattgaaattgatgtattgtggactaatatcatgccccacgatccg
gttgaaacaaaatgggctagtatcggacccctcaccattctttctttcgatattgaatgc
gcaaatcggcgaggtatttttcctacgcccgataacgatccaattattcaaattggcaac
gttatcgcaaaacacgacaaattagaaatgaaaaaggtaatttttgtgttgggtaaaaat
tgtgaccctatcgaagacgccaagatatttctttttcattctgaacaggagatgttaaaa
gcttggtctcgttttgtgcaaaaggtagtagaccctgatattattactggatacaatatt
aataattttgacttcccgtatttaattggtcgggccaaacatttgaacattgatgatcaa
ttttatctaagtagaataaaaaatgtaaaatctttcattacgagttgggggtttgaaagt
aaacaggtgggtaaaatcgttaataaatgtattaacgtggagggtcgatgtattatggac
gttttaagcgttattaaaagagaatacaaattacggtcttacagtttgaatgcggtttct
cagtattttttaaatgaacaaaaagatgatattcaccacaccgaaatatcagaattacat
cgcactagcgcccaaacgagacgaaaattagccgtttattgtttaaaagatgcccttttg
ccactaaaattaatcgataaattaatgttatctatcaattacattgaaatggcgcgggta
acgggagtcccgttaacttttatcctcacgagaggtcaacaaataaaaataatgtctcaa
ttattgcgaaactgcgccttggaaaattttattgttccatcgtgtgaagggggattgaaa
gggtgtatgggttatcagggcgctacagtcattgaacctgcgaaaggattttataactcc
cctatcacgacgttagatttttgttcattatatccgactataattatggcccataattta
tgttatactacattgttattaaccaataatgataaaaccatattagcgtctacggataat
tatactaaaacgcccacaaataattatttcgtcaaacctcatatacgtaaaggtttattg
cctagaattctagaaaatttactaatggcgcgcaaaaaagccaaggatgaactgaaacgt
gaaactgatccgttaaggaaaaaagttctagatggccgacaattagccttaaaaatatcg
gccaattctgtatacggtttatttacgggcgcgcaaatgagcggtaaattgccctgcatt
gaaatatctcagagcgtgacagcgtttggacgcgaaatgatcatgtttacgaaaaataag
atcgaagagaaatacgttaacgccaaagtcatttacggagatacagattctgtcatgata
aactttggtgtcgataccatccaagaggccatagtattaggtcaagaagcggctgctttt
gttacaaacttttttatgactccaattaaattagaatttgaaaaggtatattttccttac
ttacttataaataaaaaacgttatgcgggattatattacacccgtcctgaaaattttgat
agaattgactgtaaaggcatagaaaccattcgaagagataattgtcgattcaccgctgaa
ttaatatccgaggttttgaatataattttgattcagagagatacagaaaaagccattaca
ttagttaaaaatactatatctgaattattacacgatcggatcgatatttcaaaattaatt
attacaaaagaattaaccaaaaccaaaaaagaatataaggccaaacaagctcatgtggaa
ttggcctataagatgaaattgagagaatccagtacagccccccaacttggtgatcgcgtt
ccgtacgtcataattaaattggataataatgagaaaaagaatacacccctgtatcaaaaa
gccgaaagtcccgaatatgttgtaaaacataatttgcaattagattataattattattta
aaaaatcaaattagaaaccccctattaagaatatttgaacctattctcgggtcaaatgtt
gaaaaaattctattaagcggtgatcatatgatttccaaaactggaactgttttaaacatt
ttatctaaaccccgaataatgtgcataaaatgcaacgctaaatatattcaatccaataat
aaaacgttaatatgtattcattgtcgtcaaaagaaaaaaatggatcagaagacaatatgt
tcatttttgaaa
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