Macrobrachium nipponense (oriental river prawn): 135211835
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Entry
135211835 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04512
ECM-receptor interaction
mnz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135211835
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135211835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mnz04515
]
135211835
Cell adhesion molecules [BR:
mnz04515
]
Integrins
Integrin alpha subunits
135211835
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP
FG-GAP_3
Integrin_A_Ig_3
Integrin_A_Ig_2
Motif
Other DBs
NCBI-GeneID:
135211835
NCBI-ProteinID:
XP_064101114
LinkDB
All DBs
Position
40:12175057..12198653
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AA seq
917 aa
AA seq
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MATVGLVSHLLLQLWQPSEAFNLWANGGIHLRGPEHSKFGYSVALCTQSLYNLNPTSPPP
PRVVVGAPRGQDHANLALEGYQLGNIFLCDLKGXCNVEERVPYMSDEDGSTNALKMGDHL
RRYGIGFGESLSTLKDDISPLVACAPRYTRAIQDRLDASYLKDKWTLQPRGACFVLKDAD
GIPELMGLQGTKYPPAQSLQNALVGFSATLIKKAELELVMGGPNAFYEEGVISIKPIGSR
GRGSQSLISARKARTETYEGWQVVQGNFDGEDTSIAVSVXNFRNSGKVKFYPPNIEPYNK
KPDNYLGEITGTEVGAKFGYSLAVGDFNGDKADDLLIGSPWAFVKGTRHLPDGGKVYVHY
SPLAKINKGQQEIPGFVEWGLFGFCTAGLGDINRDGYGDAAISAPYAHSPDEGGIVYIYN
GSPKGLIQKPTQMLRASQFPNAMRGFGFSLDGGLDMDGNGYPDVVVGAVDSNNAVLLMSA
PVITLFGEVSFQSETLNDENSCDNELAGYRKVKGVCFYLNIDINYKAFNYTKDINAQLRM
VLKDNSESPKFIFKVTNDHRYNMNYTIRPVGSKVRGRGIYVFAKSDRSVIGQPVAVSVSV
ILNPPPAQDASAGPGTSQATPVPPVLDGLGPTSFNTSIILTCADNNTCFSKPDMSIMAYP
TTLTIGKGYMSLPVLVEARHDPAYQVEVKVNHPESIKFHRVEGTGLIPECRYGTLVGMTS
FDEFTCVFTFIEALEKVNFTLFFEHNPYALMEHLEKRNLDYLTIDLEVKSDSKDTDVKDN
KFGQGQGRYQCPGLHRVSSNSTGWKSQPDSTTVKVNETLTWSEIQSIFPPKNHSLAADRL
GPKIAQSFSVTNAGPSPVKGAKMAIQLALFRGDERIFYLHEEPIMSKNVTCDWPQINPWR
MQVLDPVDGHTTQVKTL
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagtggggctcgtgtcacatctgttactacagctgtggcaaccctcagaggcc
ttcaacctctgggctaacgggggaatacacctgcgcggaccagaacactcgaaatttggc
tacagcgtggcgctatgcacccagtctctttataacctaaacccaacttcccccccaccc
cccagagtggtcgttggggcaccgcggggccaggaccacgccaaccttgccctggagggg
taccagttggggaacatcttcctgtgcgacttgaagggcnggtgtaacgtagaggaacgc
gttccttacatgagcgatgaggatgggagcacgaatgcgctgaagatgggggatcacctg
aggagatacggaataggatttggcgagtcactcagtactctgaaagatgatatctctcca
ttggttgcctgcgcccctcgctacacccgggcgatccaagacaggttggacgcctcttac
ctgaaggataagtggacgctgcaaccccgtggggcctgcttcgtcctgaaagatgctgac
ggcatcccggagctcatgggccttcaaggcaccaaatacccaccggctcaatcgctacaa
aatgccctggttggattcagtgccactttgattaagaaggctgaactcgaactggtcatg
ggaggtccaaacgccttctatgaagaaggagtgatatcgatcaaaccgatcggcagtcga
gggaggggctctcaaagccttatatccgcgcggaaggctaggacagagacctacgaagga
tggcaggtggtccaagggaacttcgacggagaagacacgtccatcgccgtctctgtgtga
aacttcagaaacagtgggaaggtgaaattctacccgcccaacatcgagccgtacaacaaa
aagcccgacaattacctgggcgagataactgggacggaagtaggagcgaaattcggctac
agcctcgccgtgggagacttcaacggggataaggctgacgaccttctgataggatccccc
tgggcatttgtcaagggcacgcgtcatctccctgacggtgggaaggtctatgtgcactac
tcgcccctggctaagatcaacaagggccagcaggagattccaggattcgtcgaatggggt
ctcttcggattctgcacggcaggactaggggatatcaacagggacggatacggcgacgca
gccatcagcgccccctacgctcactcgcctgacgaaggagggattgtttacatctacaac
ggctcccccaagggattgatacaaaaaccgacgcagatgctccgcgcctcccaattcccg
aacgcgatgcgaggcttcggcttcagcttagacggcggcctagacatggacggcaacggg
tacccggacgtcgtcgttggagccgtggattctaacaatgccgtcctgctcatgtcagcc
ccggtcattaccttattcggagaggtcagcttccagagcgagacgctgaacgacgagaac
agctgcgacaacgagctggcgggatacaggaaagtgaagggcgtctgcttctacctgaat
atcgacatcaattacaaggcgttcaactacaccaaggacataaatgcccagctacgtatg
gtcttgaaagataactccgaatcgcccaagtttatcttcaaggtcacaaatgaccacagg
tacaacatgaattacaccattcggcctgtagggagcaaagttcgggggcgtggaatatac
gtttttgctaagagtgaccgatcagtgataggccagcctgtagcagtttcggtctcagtc
atcttgaacccaccacctgcacaggacgcctcggccgggcctggcacttcacaggcaaca
cctgtgccacctgtcctggatggcctgggtccgacgagcttcaatacttccatcattctc
acctgtgctgacaacaatacctgtttctccaagcccgatatgtccattatggcttatccc
acaaccctgactattggaaaaggctacatgagtctaccagtcctggtagaggcccgccat
gacccagcttaccaagtggaagtgaaggtcaaccaccccgaatccatcaaattccaccga
gtggaaggaacaggtctcattccagaatgcaggtacgggaccctcgtcggtatgacgtca
ttcgacgagttcacgtgtgtcttcaccttcatcgaagccttggagaaggtcaatttcacc
ctgttcttcgaacacaacccctacgccctcatggagcacctggagaagaggaacctcgat
tatctgaccattgacctcgaggtcaagagcgacagtaaggacacagacgtcaaggacaac
aagttcggccaaggtcaaggtcgttaccagtgcccgggtcttcaccgagtgtcctccaat
tcgactgggtggaaatcccagccagattcgaccacggtgaaggtcaacgagacgctcaca
tggtcagagatccagtccatattccccccaaagaaccactccctcgccgccgatcgcctg
ggacccaagatagcccagagcttctcagtcaccaacgcgggaccaagcccagtcaaggga
gctaagatggccattcaactagcgctcttcagaggcgacgagagaatcttctaccttcac
gaggaaccgattatgtccaaaaatgtgacatgcgactggccacagatcaatccttggagg
atgcaggttttggatccggtcgacggccacacgacgcaggtcaagacgctttga
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