Macrobrachium nipponense (oriental river prawn): 135212041
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Entry
135212041 CDS
T09903
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2-like
KO
K17908
autophagy-related protein 18
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04136
Autophagy - other
mnz04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135212041
04136 Autophagy - other
135212041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnz04131
]
135212041
03029 Mitochondrial biogenesis [BR:
mnz03029
]
135212041
Membrane trafficking [BR:
mnz04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
135212041
Mitochondrial biogenesis [BR:
mnz03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
135212041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
DUF7165
EIF3I
BCAS3_WD40
Beta-prop_WDR35_TULP_N
VID27
Beta-prop_Vps41
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
135212041
NCBI-ProteinID:
XP_064101419
LinkDB
All DBs
Position
40:complement(27001749..27111823)
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AA seq
450 aa
AA seq
DB search
NVCTCCNFLNVYPLNFHYLCFRSLGVGTKVGYKLFSLNTVDKVEQICDNVNEDTCIVERL
FSSSLVAIVSLSSPRKLKVCHFKKSSEICNYSYPNTILAVKLNRARLVVCLEESLYIHNI
RDMKVLHTIRDTPPNPTGLCALSISNDNCYLAYPGSNTIGQVQIFDAQNLQAKTMIPAHD
SPLAAIAFNASGTKIATASEKGTVIRVFNITDGARLHELRRGMKRCATIFSLAFSPDSLF
LISSSNTETVHIFKLEEVKDTQRVVVEEQQGLMGWMSKAVTASASYLPAPVTDMLSQGRA
FATITLPFQGVRNVCAITTIQKQPRVVVASTDGYLYIYNLNVVEGGDCTLLKQHRLDGSG
ESCTPSSESSAIPGPYPGAAKKTEPVNTTGSSYAGVVRGPSAGVMTGSTSADMLPSLNQD
SDKMNEMAAACESPPKSVLKFDDEKEFPPV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
aatgtatgcacatgctgtaactttcttaatgtttaccccttaaattttcattatctctgt
ttcagatccttaggagttgggacaaaagttggttataaattattttcccttaacactgta
gataaagttgagcagatatgtgataatgtaaatgaagatacgtgcattgttgagcgactc
ttctccagcagcttagtggccatagttagtttatcgtcgccacgcaaactcaaagtttgc
cattttaagaagagttcagagatatgcaactatagttaccccaacaccatcttggctgtg
aagctaaatcgagctaggttagtggtgtgtttggaggaatcgttgtacattcataatata
cgtgacatgaaagtacttcataccatcagggacacgccacctaatccaacaggcctttgc
gccttatctatttcaaatgacaattgttatcttgcatatccaggatcgaatactattggt
caagtccagatctttgatgctcaaaatttgcaagctaaaacaatgattccagctcatgac
agtccattagctgccattgcctttaatgcctcaggtacgaagattgccacagcttcagaa
aaaggaacagtcattagggtattcaacatcactgatggcgctcggttgcatgagcttcga
agaggaatgaagcgatgtgctacaattttctctttagcgttctcaccagactctctcttc
cttatttcatcgtcaaatacagaaaccgtacatatattcaaattagaagaagtgaaagac
acgcaaagagtggtagttgaagaacagcaaggcctcatggggtggatgagtaaggctgtg
acggcatctgcgagttacctacctgctcctgtcacagacatgttaagtcagggcagagcc
tttgcaaccatcactctaccttttcagggagttcggaatgtttgtgccattaccacgatc
caaaaacaaccaagagtggtggtagcatctacagatggatacctgtacatctacaatctt
aatgttgtcgaaggtggtgattgtactctactaaaacaacataggcttgatggaagtggt
gaaagttgcactccaagcagcgaaagtagtgcaatacctggaccttatcctggggctgct
aagaaaacagaaccagtgaacacgacgggaagcagctatgcgggagtggtgagggggcct
tctgctggagtcatgacaggtagtacatcagctgacatgcttccatcactcaaccaggat
tcagacaagatgaatgaaatggcagctgcttgtgaatctcctccaaagagtgtccttaag
ttcgatgatgagaaagagttcccaccagtgtga
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