KEGG   Macrobrachium nipponense (oriental river prawn): 135212154
Entry
135212154         CDS       T09903                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
mnz  Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03020  RNA polymerase
mnz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    135212154
  09124 Replication and repair
   03420 Nucleotide excision repair
    135212154
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mnz03021]
    135212154
   03400 DNA repair and recombination proteins [BR:mnz03400]
    135212154
Transcription machinery [BR:mnz03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     135212154
DNA repair and recombination proteins [BR:mnz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      135212154
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_recom DZR SR1P Lar_restr_allev CpXC
Other DBs
NCBI-GeneID: 135212154
NCBI-ProteinID: XP_064101644
LinkDB
Position
40:complement(50722227..50766373)
AA seq 127 aa
MSLMSKDENGPGFVGIRFCQECNNMLYPREDKENKILLYACRNCDYKMPTNNNCIYVNKL
MHEIDELRHINPEVIQDPTLPRTDDHPCPRCNSREAVFFQAQTRRAEDEMRLYYVCCNAE
CTHRWTE
NT seq 384 nt   +upstreamnt  +downstreamnt
atgagtcttatgtcaaaagatgaaaatggtccagggtttgttggaatcaggttttgtcaa
gagtgtaacaatatgttgtaccccagagaagataaagaaaacaaaattcttctctatgcg
tgcagaaactgtgactacaagatgccaaccaataataattgtatttatgttaacaagctg
atgcatgaaattgatgagttacgacacatcaacccagaagtcatacaggatccaacattg
cctcgaacagatgatcatccatgtccacgctgcaactccagagaagcagtctttttccag
gctcagaccagaagagctgaagatgaaatgagactgtattatgtttgttgtaatgcagag
tgtacccatcgctggactgaatga

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