Macrobrachium nipponense (oriental river prawn): 135212392
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Entry
135212392 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135212392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135212392
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135212392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
TrbL_4
Motif
Other DBs
NCBI-GeneID:
135212392
NCBI-ProteinID:
XP_064101831
LinkDB
All DBs
Position
41:20015221..20078187
Genome browser
AA seq
1199 aa
AA seq
DB search
MTTRFCQHACCQKLNLVKVDFSVLIYRSDLAYFDGLHETILSVGLVKPKKGVFKSYIEHL
LCLTTTSEIVLLGVSFSQSTVDGYSGMHLLPEPLFSVPADGSYILTITGTADGRVFMGAK
DGCLYELVYQAEDGWFTRKCQKVNHTRSTLSYILPFLAFSEDDPINQVEVDDTRHILYTL
SDKGTITVYDLDADGKGTCRVVSVPHNNIMNAALQAAKTVDKSNFKGVVSLCPISTYESP
HIHLVVVTGTGVRLYYTTVNINGGPGQRPSQLLLLHVRLPPGFAANATVYRPTKVHKALY
SHGTCVLCSNESNEADTIWTMSSDQYPYHPTLAESQSTHAVDGYVWALADVTPQLWCSAL
NPPTAQGTQPPLLVTQHQQAPRQLVLLSANGAHILTFQRPVDQLRQLLEEAGGAESSIIK
DFFSAMTPTQACATAIILATEANNQNAQVAEWATRALFLYGANAPPAAPVSTPPVFPLQT
PSTYNFQPTQVSTPIIGQNTTLQDTMFSPLHNALYLFMARILRPAWGTPVAREMLVDGKP
VVVSCMNAEEFGFLANQVELLAKFLLTNQGGSSVHSLSTSNTSLNITRYGGDGSERASLL
ALRSLLGQTLEVLRLLTLLTTHNFNTITSAIQKEIREQLRGISLRDLILSGREVCRALIM
ALLDRYHGDNASADAISLRLRDICPGLYRVEDAKLAKANEIILAAKASSNKIEKENGFKE
AVSLCKQIGHHVNVAGISSQLASGGAYEAIVDLCLSVAGQRDPTGIALHYYKNNEPAEDH
QGYVAFTSRMECYRVIMDQLNQLVGAGVVPPSSPSVPSRPGPPTPPPSTLPSTDDYTVCN
QMMNLIVSSNDELANVTLYQWLVDTNRTERLLAISSPYLENFLTRSNGQAPLHQLLWRYY
ERNQDYFKAAKTLLLLAEQIGDTPVHVRVEYLSRAIMCLSSCEMNTASSYSDFMLHLEEK
KSVARVQLMILDALQSDGTSADVIAQLNSSLLTLTTLYEKFAEPWSLWECKLAIVHCAGH
SEPQLVQLIWTKIIETELDRSLSNAVETRIDILASKIKTLARIYSTNPNYFPLEHIIREC
EIKSVQLKVQKPWVVTALQSCGILVSKLINIYHKLYRSGDTVWEVERSPYHLLGVSAHLI
SMLTETXSSVQPNQKRALREQCLDYVAEYITELGASADPSAGVIYAHLKTCQAQLERFM
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgaccactagattctgtcaacatgcatgttgtcaaaagttgaatttggtaaaagttgat
ttttctgttttgatctacagaagtgatttggcatattttgatggtcttcacgaaaccatt
ctcagtgttgggttagtcaagcccaagaaaggtgtcttcaagtcatacatagaacatctg
ctgtgtcttacaacaacttcagaaattgtcctactaggggtgtcattttcacagtcaaca
gttgacggttattctgggatgcacttgttacctgagccactcttctctgtaccagcggat
ggctcgtatattctcaccatcactggcacagctgatggccgtgtgtttatgggagcaaag
gatggatgcctttatgaacttgtttaccaagcagaagatgggtggtttactcggaagtgt
cagaaggttaatcacaccagatcgaccttgtcatacatcttgcctttccttgctttttct
gaagatgatcctataaaccaggttgaggttgatgacaccagacatatactgtatactctt
agtgacaaaggtaccatcacagtttatgatttagatgctgatggcaagggtacatgcagg
gttgtatcagttcctcacaataacataatgaatgctgctctccaagctgcaaagactgtt
gataagtcaaatttcaagggcgttgtgagtctttgccctattagcacatatgagtctccg
catattcatttggtagttgtcacaggcacaggagtacggctttattatacaactgtcaat
ataaatggtggacctggtcaacgtccttcacaacttttgctcttgcatgtgcgtcttcct
cctgggtttgcagccaacgccactgtataccgaccaacaaaagttcacaaagccctttat
tcacatggaacctgcgtactgtgttccaatgaaagcaatgaggcagataccatatggacg
atgagcagcgaccagtacccttatcatccaactctggcagagtctcagagcactcatgct
gttgatggatatgtgtgggctctggctgatgtcacaccacaattatggtgctccgctctc
aaccctccaacagctcagggaacacaaccacctctgcttgtcacccaacaccagcaggcc
ccacgacaactggtcttgctttctgcaaatggtgctcatattctcactttccagcgccca
gtagatcaactaagacaattattagaagaggctggtggggcagaatcatctataattaag
gactttttctcagcaatgaccccaacccaggcttgtgcaactgccattattttggccaca
gaagctaataatcagaatgcacaggtagctgaatgggctacaagagccttgtttttatat
ggagctaatgctccaccagctgctccagtgtcgacaccacctgtgtttccacttcaaaca
ccctcaacttacaattttcagcctactcaagtatcaacaccaataattgggcagaataca
acattacaagatacaatgttctcacccctacacaatgctttgtatttgttcatggcaaga
atactgcgtccagcttggggtactccagttgctagagaaatgcttgttgatggcaaacca
gtggttgtgagctgtatgaatgctgaggaatttggatttttggcaaatcaggttgaactt
ttagccaaatttttactcacaaaccaaggtggttcttctgtgcattctctgagcacgtca
aatacaagcttaaacattacaagatatggaggagatggttctgagagagcatctttgttg
gccttgaggtccttattgggtcagacattggaagtattgagattactgacgttgctaaca
actcacaactttaacaccattacatctgctattcagaaagagatacgagaacagttgaga
ggtataagcttacgtgatctcatcttgtcaggacgtgaagtgtgtcgggcccttatcatg
gctcttttggataggtatcatggggataatgcatcagctgatgcaatatcgctacgcttg
agggacatatgccctggtttgtatagagtagaagatgcgaagcttgcaaaagcaaatgaa
attatcttggctgcaaaggcaagcagtaacaagatagagaaagaaaatggcttcaaggaa
gcagtgtctctatgcaagcaaattggccatcatgttaatgtagctggaatcagcagtcag
ttggctagtggtggagcatatgaagctattgtcgatttgtgtttgagcgttgctggtcag
agggacccaactggaattgcattacattattacaagaataatgaaccagctgaagaccac
cagggctatgttgcatttacttcaagaatggaatgttatagagtaattatggaccaactt
aatcagttggttggtgctggagtagttccaccatcatctccaagtgtgccatctcgtcct
ggacccccaacaccacccccttcaacattaccgtcaacagatgactacacagtatgcaat
caaatgatgaatctaattgtcagtagtaatgatgaactagctaacgtcactctctaccag
tggctggttgacactaatcgaacagaacgtttactggcaatatcatcaccataccttgaa
aatttcctcacacggtcaaatggacaggcaccacttcaccagcttctttggagatattat
gaaagaaaccaagactattttaaggctgctaaaacacttcttttgttagctgaacagatt
ggggacaccccagttcatgtacgtgtagaatacctgtctcgtgccataatgtgtttgagt
tcctgtgagatgaatactgcatcaagttactccgattttatgctacacctagaagaaaag
aaatctgtggctagagtacagttaatgattctagatgccctgcagtcagatggaaccagt
gcagatgtaattgctcagttgaactcatctttactgacattaacaacattatatgagaag
tttgctgaaccatggtccctatgggaatgcaagttggctattgttcactgtgctgggcac
tctgaaccccaacttgtccagcttatctggacaaaaataatcgagacagaactggatagg
tcgctttctaatgcagttgaaacacgaatagatattctggccagtaaaattaaaactctt
gctcgcatatattctacaaatcctaactattttcccttggagcacataatcagagagtgt
gagattaaatccgttcagctaaaagtccagaaaccttgggtagtcacagcattacaaagt
tgtggaattcttgtcagcaaacttataaatatctatcacaaattatacagaagtggagat
acagtttgggaagttgaaaggtctccttatcaccttcttggagtgtcagctcaccttata
tcaatgttaacagaaaccncatcttctgtacaaccaaaccaaaaacgagcgttaagggag
cagtgtcttgactatgtggcagagtacattacagagcttggagcgtcagcagatccttca
gcgggtgttatttatgcacacctaaaaacttgtcaggctcaactggaaagatttatgtag
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