Macrobrachium nipponense (oriental river prawn): 135212754
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Entry
135212754 CDS
T09903
Name
(RefSeq) DNA polymerase subunit gamma-1-like
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135212754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnz03032
]
135212754
03029 Mitochondrial biogenesis [BR:
mnz03029
]
135212754
Enzymes [BR:
mnz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
135212754
DNA replication proteins [BR:
mnz03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
135212754
Mitochondrial biogenesis [BR:
mnz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
135212754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
EF1G
Motif
Other DBs
NCBI-GeneID:
135212754
NCBI-ProteinID:
XP_064102568
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All DBs
Position
41:complement(49279141..49354135)
Genome browser
AA seq
1330 aa
AA seq
DB search
MALRFPARYFSLYGIRINQGHPVCLVLDAYNCASMGWYSSKRTVKISGKGKISKDARISD
EQDSHNSETHTLWENLDSSDYSCFAEKYRENSESKDIETNEIQVVPVNEVLKDLLIDRGF
NAAKCTNSEEVFPSSFDQDKRTKPKDLAETHTSNLKAIKFRSKYPFTKSKTSNIIANRRK
IILVEKGESINFTKIANNIGKKNFTNTGSFHKGTARGTSSENIYGALKQMNMLKHNNNPS
KTLDMSEEIFVEESKLRRNCLGIQMLSPSLFNQIFSKVPPKQPKEQQEDFLRSKMHLEDQ
SLWGKEPSVLPESDFLIPPIKGSNLEEHFHYIAEEQCKPYKELLNKLLQGTLPSFPDHWQ
FTPGWTQYNADGTFSSVDFPSCRALVFDVEVCVKEGGHPTLAAAVSDKHWYSWCSDYLIS
NCEKNGEVTVDDLIPLGSSYNFKTKLRDDENECVPRVVVGHNVSYDRLRVSDQYQLKSSL
LRFVDTMSLHIAVSGLVSEQRALMMKNKASETKIRLPWMSVGCQNNLSDVYKFYCKDDLA
KDPRDVFVKGTLLDVRNDFQNLMSYCANDVKATFLVLKSLLPLFFKRFPHPVTFSGMLEM
GSAFLPVTENWTKYVSAAEGKYHELERLLNEELVRQAQESLALRESDRYKRDPWLWNLDW
STPKGRVKMLPGYPNWYRKLCAQTGEREGTPEPENMSTSLQIVPKILKLTWEGFPLHYER
RYGWGYLKPVFENYTQFQSSHSASHEVSQDKEQNKVEFPIDVLYEICSDKNNVRTVTLDE
VIQDREKRRLDSPETEEDWQLVLGESLSPDKDKRGRHSTSKNQNLEGRSYDIGIPGVVFV
PLPHKDGPGNRVGNPLAKDFLNKIEDNTLSSYHGGIAKAVLETNKMLSYWKNNRDRILSQ
MVVWDRKQELEDCDSASDEVSTRQTGIILPLVVTAGTITRRAVERTWMTASNAYSDRIGS
ELKAMIEAPPGYKFVGADVDSQELWIAAVLGDAYFSSEHGATAFGWMTLQGKKSDGSDMH
SRTAEMAGISRDHAKVINYGRIYGAGVKFIQRLLKQFNHKLSDEDAQKRATSLFEATKGK
KGWLLSDKGEELASEILYPYNGEAMSRKEVNALLRKAEQCGIEATFDEVIDGSPVWVGGS
ESHMFNCLEAIARSDTPRTPALGARITRALEPKFVDDQFMTSRVNWVVQSSAVDYLHLML
VSMKWLFEKYNITGRFCISIHDEVRYMVSEEDCYRAALALQITNLLTRSLFAIRLGFKDL
PQSVAFFSSVDIDQVLRKEPHLDCVTPSNPDGLRKGYGIPPGESLDIERILEITQGRLDK
TDKQEFSEDT
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggccttacgttttccagccagatattttagtttatatggaataagaataaatcagggg
catccagtttgtttggttcttgatgcctataattgtgctagtatgggttggtattcaagt
aaaaggactgtaaaaatatctggaaaaggaaagatttccaaggatgcaagaatcagtgat
gaacaagattctcataattcagagactcacactttatgggaaaacttggactcctctgac
tattcatgttttgcagagaaatatagagaaaattctgaaagtaaagacattgaaaccaat
gagatacaagttgtacctgtcaatgaagttttaaaagacctgttaatcgatagaggtttt
aatgctgctaagtgtacgaattctgaagaagtttttccaagctcatttgatcaagataaa
agaacaaaacccaaagacctggcagaaacacacacaagtaatctaaaagccataaagttt
agatcaaagtatccatttacaaaaagcaaaaccagtaatattattgccaacagaaggaaa
attattttagtggaaaaaggtgaaagtattaatttcaccaaaattgccaacaatataggc
aagaaaaattttacaaatactggttcatttcataaaggtacagctagaggtacctcatct
gaaaatatttatggtgctcttaaacaaatgaatatgttaaaacataataataatccttcc
aaaactttggatatgtctgaagaaatatttgtggaggaatcaaaacttcgtaggaattgc
ttgggaattcagatgctttcaccttccttatttaaccagatctttagtaaagttcctcct
aaacagccaaaagaacagcaggaagattttcttcgtagtaaaatgcatcttgaagatcaa
agtttgtggggcaaagaaccatctgtgttgccagaaagtgattttcttataccgccaata
aaaggctcaaatcttgaagagcatttccattatattgcagaagaacagtgtaagccttat
aaagagctgctcaataaacttctacaaggcactcttcccagttttccagaccattggcag
tttactcctggttggacccagtataacgctgatggaactttttcctctgtggatttccca
agttgccgtgcactagtgtttgacgtagaagtatgtgttaaggaaggtggtcatcctaca
ttagcagcagcagtatctgataaacattggtattcatggtgcagtgattacctcatttct
aactgtgaaaagaatggtgaagttactgtagatgatttaatcccattggggagttcctat
aattttaagacaaaattgagggacgacgaaaatgagtgtgtacctcgtgtggtcgtaggg
cataacgttagctatgatcgcttgagggttagtgatcagtatcagttgaaaagctcgtta
ttaaggtttgtggatactatgtctttacatattgctgtgagtgggttagtgtcagaacaa
agagcgctgatgatgaaaaacaaagcaagtgaaacgaagataagactcccatggatgtct
gttggatgtcaaaataatctcagtgatgtatataaattttattgtaaagatgatcttgca
aaagaccctcgtgacgtttttgtgaaaggaacattattagatgtgcgtaatgacttccag
aatttaatgagctattgtgctaatgatgttaaagccacctttttggttttgaaaagcttg
cttccattattttttaagagatttcctcatcctgtgaccttttcaggaatgttggaaatg
gggtcagcattccttcctgtcacagaaaattggacaaaatatgtcagtgcagcagaagga
aaatatcatgaacttgaaaggttactaaatgaagagttagtgaggcaagctcaagagtct
ttagcattaagagaaagtgacagatacaagagagacccatggttatggaatcttgattgg
tctactccaaagggaagagtgaaaatgttacctggttatccaaattggtatcgcaagctc
tgcgctcaaactggggagcgagaaggtactcctgagccagagaatatgagtaccagccta
cagattgtaccaaagatacttaaactaacttgggaaggtttccctcttcattatgagaga
agatatggttgggggtaccttaaacccgtgtttgaaaattatacacaatttcagtcctct
catagtgcctcccatgaagtctctcaggataaggagcaaaataaagtagaatttccaatt
gatgtgctttatgaaatttgttctgataaaaataatgtgagaacagtaactctggatgaa
gtcattcaagatcgagaaaaacgacgtttggattctccagaaacagaagaggattggcag
ttagtgttaggagagagtctttctccagataaagataaaagagggaggcatagcacatct
aagaaccaaaatttggaagggaggtcttatgacataggcatacctggagtagtttttgta
ccactacctcataaagatggacctggaaatcgtgttggcaaccctttagcaaaagatttt
ttgaataagattgaagataacactttgagcagctatcatggtggcatagcaaaggctgtt
ttagaaacaaacaagatgttatcttattggaaaaataatagggatcgaattctgtcacaa
atggttgtttgggatcgcaaacaggagctggaggattgtgactctgcgtcagatgaagtg
agtacaaggcagactggtattattttaccattggttgtcactgctggaacaattacaaga
agagctgttgaacgtacctggatgactgcatctaatgcttatagtgatcgtataggttca
gaacttaaggcaatgattgaagctcctccaggttacaagtttgtgggtgcagatgtagat
tctcaagaactttggatcgcagcagtgcttggggatgcatatttttcaagtgagcatgga
gcaactgcttttggatggatgactctgcaaggaaaaaagtctgatggatcagacatgcac
agtcgtactgcagaaatggcaggaatatcacgtgatcatgcaaaggttataaattatggg
agaatttatggagctggtgtcaagtttattcagcggctactcaagcagtttaatcacaag
ctctctgatgaggatgctcaaaaacgtgcaacatcgttattcgaagctaccaagggaaag
aagggatggctgctaagtgataaaggagaggaattagcttctgaaatactgtacccttat
aatggagaagctatgtctaggaaagaagtgaatgcactgttaagaaaagctgagcagtgt
ggaatagaggctacttttgatgaggttatagatggatcacctgtttgggttggtggctct
gagtctcacatgttcaactgccttgaagctattgccagatcagacactccaagaacccct
gcattgggagctcgcataacccgggccctcgaacctaaatttgtagatgaccaatttatg
actagcagagttaactgggttgttcagagctcagctgtcgattacttacacttaatgtta
gtgtcaatgaagtggcttttcgagaaatataacattacaggccggttttgcatcagtatc
catgatgaggttcgatatatggtgtctgaagaggattgttatagagctgccttagcactt
cagattacaaatcttcttactcgctctttgtttgcaatcagattaggctttaaggatctg
ccacaatcagttgcctttttcagcagtgtagatatagatcaggttttgaggaaagaaccc
catttggattgtgtgacgccatcaaacccagatggtctccggaaaggctatggaattcca
cctggtgaatcccttgatattgaaaggattttagaaatcacccaaggaagactggataaa
acagataaacaagagtttagtgaggatacttga
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