Macrobrachium nipponense (oriental river prawn): 135212810
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Entry
135212810 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135212810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnz03400
]
135212810
DNA repair and recombination proteins [BR:
mnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
135212810
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_III
MutS_I
MutS_II
BESS
Motif
Other DBs
NCBI-GeneID:
135212810
NCBI-ProteinID:
XP_064102652
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Position
41:complement(30004021..30075689)
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AA seq
726 aa
AA seq
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MLNSVLKHRDLDARHNNDISDLIRSLDTSKSEKSRTVSWNLDIVQKWLLGDSYEPIHSVS
LRNLTKKTLFPVALAIAKTVSELQAINKRVGFSQGNAVCSLSLLFLAKNKDVNKPWQRSF
TLKNLMDIIGPEEKERLLCPVRALHYYLKRTEKIKGPAKISSLFCLLQGMRQWWELKSLH
YDTVLFFKMGKFYELFHMDAILGVQELGLIMMKGEQAHVGFPEIAYGRYSSTLIEKGYKV
ARIEQTETPEMMEKRVKSMTKPTKFDRVVKREVCQISTKGTRVYSVLDGEASESSTSYLL
ALAERSTRGAGDGSELGVAFIDTSIGTFHLGQFTDDRHVSRLRTLMAHYPPVQILVERGR
LSQKTRRVVNSSVPSNLCDDLVPEKEFWTSSKTLSFLAEGTYFKGEDSSLQWPEELKNLL
DENDTLGLTAHPRYELAVSALGALVWYLMDCHLEEQLLTRKLFTLYNPVDVVAAEEKANK
GSLPSFIRNRHHMVLDGVTLRNLEIFENTRGGVDGTLYQKLDRCSTPFGKRLLRKWLCAP
LCNPSSIESRLDAIEDLNNNPDIVEEVAPLLKTLPDLERLLAKIHTQGLNRSSSHPDXRA
IYFEEVKYNKKKVVDFLAALGGFKTCMEIQKAFKSVADSLQSKLLQKCLNVTENGGDFPS
LKEVLKFFDTAFNHEEAKREGTIIPSHGVDTVYDSAVEQMKTTKDRLADYLKEQCRHFGA
KVCVRI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgctaaactctgtgctcaagcacagagatttagatgccagacacaacaatgacattagc
gatcttattagatctctggatacttccaagtcagaaaagtctagaacagtctcttggaat
ctcgacatagtacagaagtggcttttgggtgactcttatgaacctatccactcagtatct
cttagaaacctcactaagaagaccctcttcccagtagctctggctatagctaaaacggtc
agtgaattgcaggctataaacaaaagagtgggtttttcccaaggcaatgctgtctgttct
ctttccctgctgtttctggcaaagaataaggatgtgaacaaaccctggcaacgttctttt
acccttaagaatctgatggatatcattggaccagaagagaaagaacggcttctctgccca
gtgagagcgttacactattatttaaagagaacagaaaagattaaagggcctgcaaagata
agcagtctgttttgtctcctgcaggggatgaggcagtggtgggagctgaagtctttgcat
tatgacactgttttgttcttcaaaatggggaagttctacgaactgttccatatggatgct
atattaggggtgcaggaacttggtcttataatgatgaagggagaacaagcccacgttggg
tttccagaaatagcttatggacggtactcatcaacattaattgaaaaaggctacaaggtg
gccaggatagagcagacagaaactccagagatgatggagaagcgtgtcaaaagtatgact
aaaccaactaaatttgatcgtgttgtcaagcgagaggtgtgccaaattagcaccaaagga
acacgtgtttacagtgtcctagacggggaagcctcagagtcatcaacttcatatttgtta
gcattagcagaaaggtctacaagaggagcaggtgatggaagtgaattgggtgtagcattt
attgatacaagtatagggacattccatcttggacagttcacagatgatcgtcatgtgtct
cgtcttcgtaccctcatggcacactatccacctgttcagattttggttgagcgaggacgt
ctctctcagaaaactcgaagagttgttaattcaagtgtcccttcaaacttgtgtgatgat
ctggttccagaaaaggaattctggacaagtagcaagacactcagtttcctggccgaggga
acttacttcaaaggggaggactcttccttgcagtggccagaagaactgaaaaatctatta
gatgaaaatgatacattaggcttaacagctcatccacgttatgaattggctgtgtctgcg
cttggtgctcttgtttggtatttgatggattgccatttagaggaacagttgttaacaaga
aaattgtttactctttacaacccagtggatgttgtagctgccgaagaaaaggcaaataag
ggatccctcccttcgtttataagaaatagacatcacatggtacttgatggtgtgacactt
cgtaatttagaaatatttgaaaacaccagaggtggtgttgatggaactctttatcagaag
ctggatcgatgctcaacaccttttgggaaaaggttgcttcggaaatggctttgtgcacct
ctttgtaatccatcaagtattgagtctcggttagatgccattgaagacttgaataataat
cctgatattgttgaagaagttgctccactcctgaagacgttgccagacttggaacgcctt
cttgccaaaattcacacacagggattgaacaggagttcaagccatccggatnagcgtgct
atttactttgaagaagtgaaatacaacaaaaagaaagttgtcgactttcttgcagccctt
ggtggcttcaaaacatgcatggaaattcagaaagctttcaaaagtgtagcagattcactg
cagtcaaagttattacaaaagtgcctaaatgttacagaaaacggtggagattttccatct
ctaaaagaagttctcaagttctttgatactgcttttaatcatgaagaagcaaagagggag
ggaacaatcatccctagtcatggtgtagacactgtgtatgacagtgctgttgaacagatg
aaaacaaccaaggacagacttgcagattatctgaaggagcagtgtaggcactttggagca
aaggtttgtgttagaatatga
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