Macrobrachium nipponense (oriental river prawn): 135213711
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Entry
135213711 CDS
T09903
Name
(RefSeq) protein similar-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04137
Mitophagy - animal
mnz04140
Autophagy - animal
mnz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135213711
04137 Mitophagy - animal
135213711
04148 Efferocytosis
135213711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnz03000
]
135213711
Transcription factors [BR:
mnz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135213711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS
PAS_3
PAS_9
PAS_4
HIF-1a_CTAD
HLH
Motif
Other DBs
NCBI-GeneID:
135213711
NCBI-ProteinID:
XP_064103892
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All DBs
Position
43:45937686..45944409
Genome browser
AA seq
1088 aa
AA seq
DB search
MCLKTDLESVGVRSHPYNRPNAKTQKNSEKRKEKSRDAARCRRGKESEIFTELANALPLP
ARTVSMLDKASVMRLTIAFLKTRALCHACLTKKCDLDGGKKLDLEMDSLFLKALDGFLLV
LSTEGDIIYSSENIASFLGLPQVDVMGQCLYEYTHPCDHEEARALVSSKGPQEPRHAFLR
LKCTLTAKGRSVNLKSASYKVVRVSGELVKGEDDAWVVALGTPVPHPSNIEFPLDKQTFV
SKHSLDMKFTYVDDNVSEFCGYAGDELMGRSLYEMHHALDTDLIKDAYKTLRIKGQVETG
RYRFLARDGGYVWVVTQATLIHGPKDHKPQYVVCLNYVVSGVESPGEVLSELQLRCSKSI
NTKSTKSQDSVPSVSLSVPSVVTHKVLQPKTDTQPKTQAVNGVPPRSPASRVVPAPAPAL
APALAPAPASAPPQPQPPTPVATTSKIFTPRTEEMNKGYLIFPDDQPFGIELKDEPEDLT
HLAPSGGDTCVPLEIPIFKPELDDEFTLDFKQIPISHTDVALFTSPTAIPDILEQGSSPE
YEEYEVTDRGKTCDRLSGGKTTVNKNGSCSPLSICSSPGSGCGLRTPEPPKPLLSQAAVF
QSPPGSKLSYRRVVESNRPVSTTESLFTQLNETAHESFTDLELKVENQNMDLDEFDMRAP
FIPLSNESLMLNQDDLMWGAHSDPIILPNSLPLGKRNSKYPGLLNGDEDSSLAQLLRDRD
PPIAGSGPEKNLESRNPTDPHCSQYQQSKFLDGGGSFVDPNQVLPGHFGGKDGDDGAGVG
AVEDDPPQVMMHETVEPPPPLINVDSHQQDCISVKRQHSPNSSPLLGHKKLCSLLYEQQH
QQHSPLQDQQQHSPRRSPEGSQHQVPQMQLHHSGIRELTTPYAPTMQQLLISKEPITVRG
GRPGGGGGGGGGGGISAPLSMHKGKDSVLRNLLNVNGECEDPSRIGEAKVITAPIRLTQD
RMTAMLLADGSDQLSYPKLRILTGSGGSFMQVSQHSFKTSSGSGKGVGGGGVGRSSGCND
NGSSSAVGGGAEGFIQRGRRQDPLLLVDPDLTIPSLSELSQLDFEVNAPANIGNLLQGAD
LLMALDQA
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttgaagacagatttggagagcgtaggggtgcgctcccacccttacaatcggccc
aatgccaagacccaaaagaacagcgagaagcggaaggagaagtcccgcgatgcggcccga
tgtcgccgggggaaggagagcgagatcttcacggagctggccaacgccctcccgctgccc
gcccgcaccgtctccatgctcgacaaggcctccgtcatgaggctcaccatcgccttcctc
aagacaagggcgctctgccatgcctgtctgacgaagaagtgcgacttggatggggggaag
aagctggacctcgagatggactcgctcttcctgaaggctctggacggcttcctgctggtc
ctctctactgaaggggacatcatctactcatcggagaatatcgcctcgttcctgggcctt
ccgcaggtggacgtgatgggccaatgcctttatgagtacacccacccttgcgaccacgaa
gaggcgcgcgccctggtgtcctccaaaggcccccaggagccacggcacgccttcctgagg
ctcaagtgcacgctcaccgccaaagggcgctcggtcaacctcaagagcgcatcctacaag
gttgttcgggtgagcggcgaacttgtgaagggcgaggacgatgcctgggtcgtggcactg
ggcaccccagtgccacatccctcgaacatcgagttcccactcgacaagcagaccttcgtc
agcaagcattcgctggacatgaagttcacctacgtcgatgacaacgtcagcgaattctgc
ggatacgcgggcgacgaattgatgggacggtccctttacgagatgcaccacgctctagat
acggatctcatcaaagatgcatacaagacattgcgcatcaaaggtcaggtggaaacgggc
agataccgtttcctagccagggacggcggctacgtttgggtagtgacccaggcaactctc
atccacggtcccaaggaccacaagccgcagtacgtcgtctgcctcaactacgttgtcagt
ggtgtagaatcgccaggcgaggttttatccgagctgcagttacgatgcagcaaaagtatc
aacactaaatcgactaaatcgcaagatagtgttccatctgtgtctctttctgtgccatct
gttgttacacacaaagtgttgcagcccaagacagatacacaacctaagacacaggcagtg
aatggtgtcccaccacgttcacctgccagccgagttgttccagctccagctccagctcta
gctccagctctagctccagctccagcttcagctccaccccagcctcaacctcctacccca
gtggcaaccacttccaagatcttcacccctcgtactgaggagatgaacaagggttatctc
atattcccagatgatcaaccatttggcatagaactgaaagatgagcctgaagacctgact
cacttggccccatctggtggtgacacatgtgtgcccttagaaatacccatattcaagcca
gagctggatgatgagtttaccctggatttcaaacagatcccaatttcacatacggatgtt
gcccttttcacaagtcctacagccatacctgacatcttggaacagggaagtagcccagaa
tatgaagaatatgaggtgacagatagaggaaaaacttgtgatagactaagtggagggaag
acaacagtaaacaagaacggtagttgtagtcccttatcaatttgtagcagtccaggttct
gggtgtggtttgcgcacaccagagcctcctaaaccgttgttaagtcaagctgcagtgttt
cagtcacctccaggaagtaaactctcatatagacgtgtagttgaaagcaaccgtccagta
agcactacagagagcctgtttacacagctaaatgaaactgctcatgagagtttcacagac
ttagagctgaaggttgaaaatcaaaacatggatttggatgaatttgatatgagggctcct
ttcataccactcagtaatgagtcactgatgctgaaccaggatgacctgatgtggggagct
cattcagacccaatcatattacctaacagtcttcctctgggaaagcggaactcaaagtat
cctggcttactgaatggagatgaagattctagtctggcccagctactgagagacagagac
cctcctatagcagggtctgggcctgagaagaatttggaatcaagaaatccaacagatcca
cactgtagccagtatcagcaaagcaagtttcttgatggtggagggagttttgtagatcca
aatcaagtattacctggacactttggtggaaaagatggagatgatggagcaggggttggt
gcagtggaagatgatcctcctcaagtcatgatgcatgagacagtggaaccaccacctcca
ttaattaatgttgattcacaccagcaagactgtatatctgttaagcgccaacattctcca
aattcatctccacttctgggccataaaaaactctgttcattgctttatgaacagcagcac
cagcagcattctcctctccaagatcagcaacagcattctccccgcagaagtccagaggga
tcacaacaccaagtaccacaaatgcagttacatcattctggaattcgtgaattaacaaca
ccatatgctcctaccatgcagcagttgctgattagcaaagagcccattacagtacgtggt
gggcgtccaggaggagggggaggaggaggaggaggtggtggaatttcagcaccattgagt
atgcataaagggaaagactcggtgcttcgcaatctgctgaacgtgaatggcgagtgtgaa
gatccttccaggataggagaagctaaagtgataactgcacctatccgtttaacacaagat
cgaatgacagctatgttattagctgatggatcagaccagttatcgtatccaaaattacgg
atactaacaggaagtggaggttcattcatgcaagtgagccaacattccttcaaaacatca
tctggatctggtaaaggtgtaggtgggggaggagtaggaaggagtagtggatgtaatgac
aatggcagcagtagtgctgttggaggtggagcagaaggtttcattcagcgagggaggcga
caagatcctctcctccttgtggatccagacttgactattccaagcctctctgaactgtct
cagttggattttgaagtcaatgctcctgccaatattggtaacctgcttcaaggagcagac
ctgttaatggctctggatcaagcttag
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