Macrobrachium nipponense (oriental river prawn): 135214331
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Entry
135214331 CDS
T09903
Name
(RefSeq) exosome complex component RRP46-like
KO
K12590
exosome complex component RRP46
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135214331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135214331
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135214331
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
135214331
NCBI-ProteinID:
XP_064104600
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Position
45:6938318..6950424
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AA seq
210 aa
AA seq
DB search
MSQHACELSFLSRSDGSALYSIGSTVALASVNGPGDVKASNRHYNKCHLEVCYSPCTGQS
MIGERALESVITKTVEQVILIHLHPRTAVNVTIQEMQSDGLALSTSINAACMALLDAGVQ
MKSTFAAVTCCLTPAETIIIEPTEAEMKESSAVVTFVFDGLDYNVVSAHQDGCLSTENFN
RCFQDCQIAAKDVINFYRRTIETKYEDDVV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaacacgcctgtgaattgagtttcctttctcgatctgatgggtcagcactttat
tcaataggtagcaccgtagctttggcatcagtgaatggtccaggggatgtcaaggcttct
aaccgccactacaataagtgccatttagaagtgtgctacagtccttgcactggccaatct
atgataggagagcgagctttggaatcggtgataacaaagacagtggaacaagtaattctt
attcatcttcatccacggacagctgtcaatgtcaccattcaagagatgcagtcggatgga
ttggctttatcaacaagcattaatgcagcgtgtatggcgctacttgatgctggcgtgcaa
atgaaatcgacctttgcagctgttacgtgctgcctcacaccagcagaaactatcattatt
gaaccgacagaggctgaaatgaaggagagttcagctgttgtgacatttgtgtttgacgga
ttagattacaatgtggtatctgcacatcaagatggttgcttgagcacagagaatttcaac
agatgcttccaggactgtcagatcgctgctaaagatgttatcaatttttataggagaacc
atagaaacgaaatatgaagatgatgttgtataa
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