KEGG   Macrobrachium nipponense (oriental river prawn): 135214664
Entry
135214664         CDS       T09903                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
mnz  Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:mnz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    135214664
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mnz03019]
    135214664
   03041 Spliceosome [BR:mnz03041]
    135214664
Messenger RNA biogenesis [BR:mnz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     135214664
Spliceosome [BR:mnz03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    135214664
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 NBCH_WD40 Beta-prop_IFT122_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 PQQ_2 Beta-prop_WDR35_TULP_N Me-amine-dh_H WDR54 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 135214664
NCBI-ProteinID: XP_064105071
LinkDB
Position
46:20172462..20241545
AA seq 227 aa
MVQQQTLKHLYQTIYSQAVSAECGLLSIGNSDGKLYIFDLKSGSASRESAVGDHLRSPSH
VLNAHTDSIYSMMSADAFCVTGTNGTITGRRWNDLRQQQSSVAWTISLDCDQANFGTPEV
NALAYDNERRIIYAACGDWRTHVYDLETGKRIQTLDGHDDYVHDVALGQSGKMIASSAED
GGVFIWDSRSGREPRHKIFPHSHEQLARLPHLEGLSHHRMLPMIVTY
NT seq 684 nt   +upstreamnt  +downstreamnt
atggtacaacaacaaacgctgaaacacctttaccagaccatttacagccaagctgtatcg
gcagaatgcggccttctttcaatcggaaacagcgacgggaaattgtacatttttgacctt
aaaagtgggagtgccagtcgtgaatcagcagttggtgatcacctaaggtcaccatcacat
gttttgaatgctcacacagactctatttactctatgatgagtgcagatgcgttttgtgta
actggaacaaatggtacaattacgggccgcagatggaatgacctaagacaacaacagtcc
agcgttgcttggacaatatctctggattgtgatcaggccaattttgggacgccagaggta
aatgccttggcttatgataatgaacgcagaataatttatgcagcttgtggggattggaga
acacatgtttatgacctagagacagggaagaggattcaaactcttgatggacatgatgac
tatgttcatgatgttgctttaggtcaaagtgggaaaatgatagcaagcagtgcagaagat
ggaggagtattcatctgggattctcgctctgggcgtgagccacgtcacaaaatttttccc
cattctcatgaacagcttgcaaggctcccacatttggaaggtttatcacatcataggatg
ttgccaatgattgtgacatattaa

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