Macrobrachium nipponense (oriental river prawn): 135214665
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Entry
135214665 CDS
T09903
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03013
Nucleocytoplasmic transport
mnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135214665
09122 Translation
03013 Nucleocytoplasmic transport
135214665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135214665
03041 Spliceosome [BR:
mnz03041
]
135214665
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
135214665
Spliceosome [BR:
mnz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135214665
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
NBCH_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR3_2nd
ANAPC4_WD40
WD40_Gbeta
DSE1_N
CFAP251_N
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_NOL10_N
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
Beta-prop_EIPR1
Me-amine-dh_H
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
135214665
NCBI-ProteinID:
XP_064105072
LinkDB
All DBs
Position
46:complement(20254478..20275212)
Genome browser
AA seq
328 aa
AA seq
DB search
MGSNTGRGGEVCILVQSTITVNLSFFSSLKSGSASRESAVGDHLRSPSHVLNAHTDSIYS
MMSADAFCVTGTNGTITGRRWNDLRQQQSSVAWTISLDCDQANFGTPEVNALAYDNERRI
IYAACGDWRTHVYDLETGKRIQTLDGHDDYVHDVALGQSGKMIASSAEDGGVFIWDSRSG
REPRHKIFPHSHEQLARPTFGRFITSVDVDNDWLVCGGGPRAGVFHLRSLALTTVLPPSK
IVHVAKFTRYAEGGDRGGIVVAGVMPHIYVCSLAGQVTAQLPCSSPCIYTVHVTRKPYTV
MTYGGMSSKLDVCYNLNYRDHVVSLHEE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggggagcaacactgggaggggaggggaagtctgtatcttggttcaaagtactataaca
gttaatctttcttttttctccagccttaaaagtgggagtgccagtcgtgaatcagcagtt
ggtgatcacctaaggtcaccatcacatgttttgaatgctcacacagactctatttactct
atgatgagtgcagatgcgttttgtgtaactggaacaaatggtacaattacgggccgcaga
tggaatgacctaagacaacaacagtccagcgttgcttggacaatatctctggattgtgat
caggccaattttgggacgccagaggtaaatgccttggcttatgataatgaacgcagaata
atttatgcagcttgtggggattggagaacacatgtttatgacctagagacagggaagagg
attcaaactcttgatggacatgatgactatgttcatgatgttgctttaggtcaaagtggg
aaaatgatagcaagcagtgcagaagatggaggagtattcatctgggattctcgctctggg
cgtgagccacgtcacaaaatttttccccattctcatgaacagcttgcaaggcccacattt
ggaaggtttatcacatcagtagatgttgacaatgattggttggtttgtggaggcggtcct
cgggcaggtgttttccacttacggtccctcgcattaacaacagtgttacccccatctaaa
attgttcatgttgcgaagtttacgcgatatgcggaaggtggtgatcggggtggcattgtt
gtagcaggtgtgatgcctcatatatatgtgtgtagtttagctggacaagtgacagctcag
ctcccatgttcttctccatgtatctacactgtacatgttactaggaaaccatacacggtt
atgacttatggtgggatgagctcaaaattagatgtgtgctacaacctaaattaccgtgat
catgttgtatccctacatgaagagtaa
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integrated database retrieval system
