Macrobrachium nipponense (oriental river prawn): 135214669
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Entry
135214669 CDS
T09903
Name
(RefSeq) cleavage stimulation factor subunit 2-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135214669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135214669
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
135214669
U7-dependent histone pre-mRNA processing factors
135214669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
Ddi2_HDD
Motif
Other DBs
NCBI-GeneID:
135214669
NCBI-ProteinID:
XP_064105076
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All DBs
Position
46:22162964..22175235
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AA seq
290 aa
AA seq
DB search
MLVLRSQEWKLKKKQSLMMGPVVESPYGPEVEPSKAPEAISNAVASLPPEQMFELMRQMK
LCVRNNPTEARTMLMNNPQLAYALLQAQVVMRIIDPKTAVQILHGGREIVEPLLPPSGPP
PTSMAPTMNGGPPGPPPGPPGPPGPPMPPGGPPHQQTYPHVSSSCFWRTWCFPGSTTRTT
TPRGHSFPAGDFDMRQTMNVPPRGPPPQGNDQDMRLAPPGMGGPPPPHPHENFGGPPHDF
ENRLSFSDDTVKEELKPGNNLDQQTPRLFEVKLLEQWWCMQEAAEYKVQQ
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtactgagaagtcaagaatggaaattgaaaaaaaaacaaagtttgatgatgggt
cctgttgtggagtcaccatatggccctgaagtggaaccaagtaaggcaccagaagctatc
agtaatgcagttgcttctttgcctccggaacagatgtttgaattaatgaggcagatgaaa
ctatgtgtccgtaataatcctaccgaagctcgcacaatgctcatgaataatccacagtta
gcatatgcattacttcaggctcaggttgtaatgcggattattgatccaaagacagctgtt
caaatacttcatggaggacgagaaattgttgagccattgttgccaccttcaggaccacca
cctacttctatggctccaacaatgaatggaggacctcccggtcctccaccgggacctcct
ggacctcctggacctccaatgccccctggtggtcctccccaccaacaaacttacccacac
gtttcctcctcctgtttctggcggacatggtgttttccagggtccaccaccaggaccacc
acgccacgaggccattccttcccagctggtgactttgatatgcggcaaacaatgaatgta
cctccacggggtccacctccccaaggcaatgatcaggacatgagactagcacctcctgga
atgggtggtcctcctcccccacatccccatgaaaactttggtgggccacctcatgacttt
gagaacagactttctttctcagatgatactgttaaagaagaactaaaacctggcaataat
ttggaccagcagaccccaaggctctttgaagtcaagctactagaacaatggtggtgcatg
caggaagctgcagagtacaaggttcagcagtga
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