Macrobrachium nipponense (oriental river prawn): 135215172
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Entry
135215172 CDS
T09903
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135215172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mnz02000
]
135215172
Transporters [BR:
mnz02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
135215172
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
SMC_N
AAA_30
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
135215172
NCBI-ProteinID:
XP_064105712
LinkDB
All DBs
Position
5:8468846..8506024
Genome browser
AA seq
1780 aa
AA seq
DB search
MKRRSLLNQFLLVMWKNLLLRKRHWLLTIFEIIIPVLLFTILLSVRVLPDSAFVPKVINT
TTVFNVADERDLKEMVCSKFGVWVPGLRVCIPAPTATVGDRRIFYGPPGAFTLGVAKYVS
EEIGMKGRFNPHENVLQAVNSTQEMDEAVQASYLMSNKSATAYYVGLFFRDTDGDEVPEH
LRYDLRLPKIWFTETLYPFLQIPGPRNFSLFSKFTGSYNLDGFTYVQSLVDRYFISETSG
NTSFRENFKVAVQMYPYPPYVQDNGMSQIYGSTLPTFVVLSLVLLSPSLIKSIVYEKETG
VRELMKLMGLNQWIGWAGWFFHSFVTIVLVSAFITVMLKASLTSRDAGGLLPPILAHSDG
ALVWVFLLTYGISSIAFCVAISTFFSRPTLATTMGILFWMISYFIPRTMMDFEYDIMGLT
PKLLSCLLPNMAITWAFRIIAMFEGRTIGIQWDRLWETGNPRDQLTPGMVLIMLVADSLI
FFLIAWYVDQVNPGVYGVPQPWHFVFKKSYWCGSRPGGEDDKGSEDDQPPLKEYFEDEPS
SLKPGIVIKNLRKEFRTLGKKTKVAVENASFKCYEGQCTVLLGHNGAGKTTTMSILTGVY
APTSGYAEVGGWNIATHLREARQELGLCPQHNMLFVDLTVYQHLLFFGRLKGMSKKTAKK
EALNLMIRLELSDKKNMYGNQLSGGMKRKLCLAISLIGGSKVVILDEPSSGLDPESRRWV
WDVVQKERGSRTFLVTTHHMEEADVLGDRVAIMAAGKVVASGSTLFLKNKFGDGYTLTLL
TSENSRVVEIGTAIKSHLPEAVLRSSIRGEITFQLPPRTDVFTSLLDDLTSRKKELGIQH
LGLSLTTMEQVFLRASSVLDDQVKDFRTSRSSLQEVNGRSTVSLNCGEDDMSSQRFLYNS
QSEIEVKLTGFSLLLQRLKAFMVKRFIYSKRKWVLLLIQALLPVLVTILCLAVDASFNED
EDQEPPLVMNTSIYPESTYYVQADGNPELQLLAENYEELFRGPYKVYNTSEIVKSLIDEG
ESNLFYYRENNIASAVFSRLGEKNVAMRAMYQSVPLHTPGVSMSLVTNALLRYATNSSES
SITTYNRPLPPNRALSRLDDNTTASGMVYSMLMPLALAFLAASFLVFPLQERETKAKQVQ
VMTGASLWVLWFTSFLWDYLVYSFSAVLIFVTIMIGDTKNFFTVDAAPGALLLLLLMFGW
GAIPMAYVFSFPFQTAASGFAVMAVVNIVAGQIIYVAVTALDMSHSTTLELVSDILNWIG
SVVPTYRASRGFQNLVDTSFNNTYCELLPDHVKDQVCEVLELVSPFDDFVQCCDNCATIG
SKKCFEKRLYLEFDDQGMGPDILNLFVNGVIFFLILVLIEVDNGRFFRWLFWSIRSIFSR
VPTEQTSGIVDEDVVAEENLVSTTIQTRLQNPGMQDDAAMLVSGLTKTFYGAVRPAVNNI
AFRVVRGECLGLLGVNGAGKTTTFRMLTGDERPSGGDAYGEKNISVVHRTRKFIRQIGYC
PQFDAIIGELTAEETLTLMGRLRGVHDSRLKRVIASLVTLVDLTECAKRPSSTYSGGNKR
KLSTAMALVGSPPLVFLDEPTSGVDPASRRRVWEAIMQAVNNGQSVLLTSHSMEECEALC
SRVVIMSRGQLRCVGTTGYLKAKFGQGYSLQIKLRINDAGGAANDDDAYNSKIAELRRVI
SQRLPGSTLTDQHKGMLAYRIPVTVSWSQLFSIMESLKSGKGFQQPTPKSEMSACHLFSL
PIVEDYAVSEASLEQVFLSFAREANDVVPDHVPKEVVTKF
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaagaagcctcctgaatcagtttctgctggtgatgtggaagaaccttctgctc
aggaagaggcattggcttctcaccatctttgagatcatcatcccagttctgctattcact
atcctgctctccgtcagggttctgcctgattcggcttttgtgcctaaagttattaataca
acgacagtgttcaacgtggctgacgaaagagatctgaaggaaatggtctgcagcaagttc
ggtgtgtgggttcctgggttgagagtttgcattcccgcaccaacagccaccgttggggac
aggcgaatattctacgggcccccgggagcgttcaccttaggggtggcgaagtacgtttcc
gaggaaattgggatgaagggtagattcaatccgcatgagaacgttcttcaggcggtgaat
tcaactcaagaaatggacgaggctgtccaagcctcctacctgatgagcaacaaatcagcg
acggcttactacgtcggtttgtttttcagagataccgacggggatgaagtcccggaacac
ctgaggtacgacctgcgattgcccaaaatatggtttacggaaactctgtatccattcttg
cagataccgggacccaggaatttctcattattctcaaagtttaccggttcctacaattta
gacggattcacatatgtccagagtctcgtcgaccgatatttcatctctgaaacctcaggc
aacacctccttcagggaaaacttcaaggttgcagtccagatgtatccttatcctccttac
gtccaagacaacgggatgagtcaaatctatggatctactcttcctaccttcgttgtcctg
tctctcgtccttctgtctccttccctcatcaagagcatcgtgtacgagaaggagacaggt
gtcagggagctgatgaaactgatgggcctcaaccagtggataggatgggccggctggttc
ttccactcgttcgtgaccatcgtcctggtttctgctttcatcacagtcatgctgaaggcc
agtttgacaagcagggacgccggcgggctactgccgcccatcctcgcccacagcgacggc
gccctcgtgtgggtcttcctcctgacgtacggcatctcctctatcgccttctgcgtcgcc
atctccaccttcttcagccgcccaactctggccaccacgatgggcatccttttctggatg
atctcctacttcataccccgcaccatgatggattttgagtacgacatcatggggctcaca
cccaagttgctgtcctgtctcctgccgaatatggccatcacttgggccttcaggatcatc
gccatgttcgaggggagaacaattggtattcaatgggatagactttgggaaacgggaaat
cccagggatcagctaacccctggaatggttctcattatgctagtggcagattcgctgatc
ttcttcttgatagcgtggtacgtcgaccaggtcaacccgggtgtttacggtgtgccgcaa
ccgtggcactttgtgtttaagaaatcgtactggtgcggctccagacccggtggcgaggac
gacaaaggctccgaagacgaccagcctcctctaaaggaatacttcgaagacgagccttcc
agtctgaagcctggaatcgtgattaagaatctcaggaaagagtttagaactctgggcaag
aagacgaaagtggcggtggagaatgcatcgttcaagtgctacgaaggacaatgtacggtt
ctccttggtcacaatggcgctgggaaaaccaccactatgtcgattctcacaggtgtctac
gcccccacgagcggatacgccgaggttgggggttggaatatagccacccacctaagagag
gcgagacaggaactaggtctttgccctcagcacaatatgctcttcgtcgacctgacagtg
tatcagcatctgctcttcttcgggaggctgaaagggatgtctaaaaaaactgccaagaag
gaagcattgaacctgatgatccgtctggaactctctgacaagaaaaatatgtatgggaac
cagctctctggagggatgaagaggaaactgtgcttggccatttcattgattggcggttct
aaggtcgtaatcctggacgaacccagcagcggcctagacccggaatccaggcgctgggtt
tgggacgtggtccagaaggagcgaggttccaggaccttcctagtcacaacgcatcacatg
gaagaggctgacgttctgggagatcgagtggccatcatggctgctggaaaggtggtggct
tctgggtcaactctgttcctgaagaacaagttcggtgacggttatacgctgacgctcttg
acgtctgaaaattcaagagtagttgaaattggtacagccatcaaaagccatctaccagag
gccgtcctgcgcagttctataagaggagaaatcaccttccaacttccccctaggacagac
gttttcacttctctcttggacgacctgaccagcaggaagaaagagctgggcattcaacac
ctgggtctgtctttgacaaccatggagcaagtttttctgagggcaagctcggtgctggac
gaccaagtcaaagatttcaggaccagcagaagcagtttgcaggaggtgaacggtcgctct
acagtcagtttaaattgtggcgaggacgatatgagcagccaacggtttttgtacaacagc
caatcagagatagaggttaaactgaccggatttagccttttgttgcaacgccttaaagct
ttcatggtcaagaggtttatttactcgaagaggaaatgggtgctcttactcatccaggct
ctgttgccagtcctggtcacgatattgtgcttggctgtggacgcctccttcaacgaagac
gaagaccaggaaccgcctctcgtcatgaatacgtccatttacccggagtctacttattac
gttcaggcagacggcaatcccgagctgcaattgctggctgagaattacgaagagctgttt
aggggaccatataaagtttacaatactagcgagatagtgaagagcctcattgacgaagga
gagagtaacctgttctattaccgtgagaataacatcgcttctgccgtattttcaagactg
ggtgagaagaacgtcgcaatgcgagccatgtatcagtcagtgccattacacactccaggc
gttagcatgtctttggtcactaacgctttgctgagatacgccaccaattcgtccgagagt
tcaataactacctataatcgacctttgccaccaaacagagcgctgagccggctcgacgac
aataccacagccagtggcatggtttactccatgttgatgcccctggcactggctttcctc
gccgcttcgttcctggtctttccgttgcaagagagagagactaaggccaagcaagttcag
gttatgacaggggcttcattgtgggtcctgtggttcaccagtttcttgtgggactacttg
gtctattcgttttcagcggtcctgatcttcgtcaccatcatgatcggcgacacgaaaaat
tttttcactgtggatgcagctccaggtgcgcttcttcttcttctgctgatgttcgggtgg
ggagccatccctatggcgtacgtcttcagtttcccgttccaaacagctgcttcgggattt
gccgtcatggcggttgtcaacatcgttgcaggccagatcatttacgtggccgtcactgct
ctcgacatgtctcattcgacgacactggaactcgtcagtgacattttgaactggattggt
tcagtggtgccaacctaccgagcatccaggggcttccaaaacttagttgacacgagcttt
aacaacacttactgtgaacttttacccgaccacgtcaaggaccaagtctgcgaagttttg
gagttggtttcaccgtttgatgacttcgtccagtgttgtgataactgcgctacgattggc
tccaagaaatgttttgagaagagattatatctggagttcgacgaccaaggaatggggcct
gatatcctcaatctcttcgtcaatggcgtcattttctttctgatcctcgtcctgatcgag
gttgataatgggagattcttcaggtggctgttctggtcaataagaagcattttctctcga
gtacccacagaacaaacgtctggaatcgtagacgaagatgttgtagcagaggaaaacttg
gtttccaccacgattcagacacgtttgcagaaccctggtatgcaagacgacgcagccatg
ttggtgtctggcttgaccaagaccttctacggagctgtgaggccagcagtgaacaacata
gcatttcgggtggtccgaggcgaatgcttgggactcctaggggtcaatggagcaggaaag
accaccactttcagaatgcttaccggagacgagaggccgtcgggtggcgatgcctacgga
gagaagaacatctctgtagtgcataggactagaaagtttatacgccagataggatactgc
ccgcaattcgacgccatcatcggcgagctgaccgcggaggagacgctgacgctgatgggt
cgcctgaggggcgtccacgactcgcgcctgaaacgcgtcatcgcgtctttggtgaccctc
gtcgacctgacggagtgcgccaagcggccgtcatccacctactcgggagggaataagagg
aagctatcgaccgccatggcgttagtcgggtcgcctcccctcgtgttcctggacgagccc
acgtccggagtcgacccggcctcccggcggcgcgtgtgggaggccattatgcaggccgtg
aacaatggacagagcgtcctgctgaccagccactccatggaggagtgcgaggccctctgc
tcccgcgtcgtcatcatgtccagaggtcagctgaggtgcgtcggcaccacggggtacctc
aaggctaagtttggacaagggtacagcctgcagatcaagttgaggatcaacgacgccggc
ggagcggctaatgacgacgacgcttacaacagcaagattgcagagcttcggcgcgtcatt
agccagaggctgccagggtcaactctgactgatcagcacaagggtatgctagcttacaga
atccccgtcactgtatcctggagccaactgttttcgatcatggagtccctgaaaagcggg
aaaggcttccagcagcctactccgaagagtgagatgtccgcctgtcacctcttctctctc
cccatcgtggaagactacgctgtctcggaggcgtctctcgaacaggtgttcttgtcgttc
gctcgagaggccaatgatgtagtcccagatcacgttcccaaagaagttgtcaccaaattt
tga
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integrated database retrieval system
