Macrobrachium nipponense (oriental river prawn): 135215292
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Entry
135215292 CDS
T09903
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04140
Autophagy - animal
mnz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135215292
04148 Efferocytosis
135215292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnz04131
]
135215292
Membrane trafficking [BR:
mnz04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135215292
Hops complex
135215292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
135215292
NCBI-ProteinID:
XP_064105909
LinkDB
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Position
5:complement(49848454..50101116)
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AA seq
690 aa
AA seq
DB search
MSTMALISDWTQLGSDIFYRKHELYSMEWGGGINLGDFMVAAAPYGGPIALTRDESKYTK
VARSGGKPIVFVFSASGRKIASFKWTGGYLLAFGWSRSEDLVCVQEDGAVLLYDMFGNYQ
HTFNLGQEVKDTHILSAQVFTSHRETGVAILSNSNRIFLVSNIYEPRTRKYPDIPGGVVE
CWCVVREERHTNVLVSQGRDLFLLSHVEQRPQALYPDWSEPGGRILEMAVSSNSRHIALL
SESGKLWIGSSDIRMKYCEYDAKSQVKPKQISWCGTGAVVLLWDMTLEVVSVNGDATSYY
LDSASYLVQEADGVRVIGSVSHDLLQKVPLVVAETLGIGSMAPGALLLEASKGFQERNTR
ANDCLGMIKNSMEEAVSQCLQAAQHEFRPQTQKMLLRASMFGKSFIPEINPEPCKKAIFT
LRVLNAVRDYRVGLPLTWSQLEHLTLPVLLDRLVFRRLFPLALQIAGFLKLPESDGASRI
LAHWACYKVLQPSQKSDEQIAKEINSKLGYTPGISYTDIANRADRAGRKQLAVKLIEYEC
RAKEQVLVLMRLGEAQTALRRAIQSGDTDLIFTVLDHLRQKLPSGDFLMLIRDFRVAKSL
YIRSCRETDTDQLRDILVQEDDFLGQALLRVKEAYQSNRADTRQASLQGAAELFRKAKNE
MAFQMTEEQIRLFKWQVNLGNSCNSHILKL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaatggctttgatatccgactggacacaattagggagtgatatattttacagg
aaacatgaactctattcaatggaatggggtggaggcatcaatctgggtgactttatggtt
gctgctgcaccatatggaggacctattgccctcactagagatgaatcaaaatatacaaaa
gtggcacgttctggggggaagccaatagtctttgtgttcagtgcttcaggaaggaagata
gcttcattcaaatggactggtggatacctcctcgcttttggatggtcacggagtgaagac
cttgtatgtgtacaggaggatggagctgttctgttatatgatatgttcgggaattatcaa
catacattcaatttgggtcaggaggttaaagatacgcacatattgagtgctcaagtcttt
acaagccatcgtgaaactggagttgccatcttaagcaactcaaatcgaatatttctcgtt
agcaacatatatgaaccacgcactaggaaataccctgatattccaggtggtgttgtagag
tgttggtgtgttgttagagaggagcgtcatactaatgtcttggttagtcagggtcgagat
ctatttcttcttagtcacgtggagcagcgaccacaagcattgtaccctgactggagtgaa
ccaggtggacgtatactagagatggcagtatcttctaattcacgtcatattgcacttctt
tcggaatcggggaagctttggattggatcttcagatataagaatgaagtattgtgaatat
gatgcaaagagtcaagttaaaccaaagcagatatcatggtgtggaacaggtgcagttgtg
cttttgtgggatatgaccttagaagttgtgagtgtaaatggtgatgcaacaagttattat
cttgattctgcatcatatcttgttcaggaagctgatggagtgagggtcattggaagcgtc
tctcatgatctgttacagaaggtccctttagtagtagcagagacacttggaatcggttct
atggcccctggtgctttgcttttggaagcatctaagggctttcaggaacggaacacaaga
gcaaatgattgtttgggtatgattaagaattctatggaagaagctgtatcgcagtgcttg
caagcagcacaacatgaatttcgtccgcagacacagaaaatgctccttcgggcatcaatg
tttggcaaaagtttcattccagaaattaatcctgagccgtgcaagaaagctatatttact
ctacgggttcttaatgctgtgagagattacagagtagggctgcctctaacatggagccaa
ctagaacatctgactctcccagtgctcctagacagacttgttttccgcagactctttccc
ttagctttgcaaatagctggttttttaaagctaccggaatctgatggtgcctcacgaatc
ttagctcactgggcttgttacaaggttcttcaaccatctcaaaagagtgatgaacaaatt
gccaaagaaatcaatagtaagttaggatataccccaggcatatcatataccgatattgcc
aatcgcgctgacagagctggaagaaaacagttggcagtaaaattaatcgaatatgaatgc
cgtgctaaggagcaagttttagttctcatgagactgggggaagctcagacagcacttaga
agagcaatacaaagtggtgacactgatctcatctttacagtgctcgatcatttacgacag
aaactcccttcaggggatttcctgatgctgataagagattttcgggtggccaaatctcta
tatatccgcagttgtagagaaactgatacagaccagctgcgggatattttagtccaggaa
gatgatttccttggtcaagcacttcttagagtcaaagaagcttatcagtcaaatagagca
gatacaagacaagcttcgttacaaggtgctgctgaactctttcggaaggcaaaaaatgaa
atggcttttcagatgactgaggagcaaataaggcttttcaaatggcaggtaaatcttgga
aattcatgcaattcacatattttgaaattatag
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