Macrobrachium nipponense (oriental river prawn): 135215665
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Entry
135215665 CDS
T09903
Name
(RefSeq) endoribonuclease Dcr-1-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnz03036
]
135215665
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
135215665
microRNA pathway
RISC loading complex
135215665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Dicer_platform
Ribonucleas_3_3
PAZ
Dicer_dimer
dsrm
Motif
Other DBs
NCBI-GeneID:
135215665
NCBI-ProteinID:
XP_064106679
LinkDB
All DBs
Position
5:137882510..138061398
Genome browser
AA seq
1341 aa
AA seq
DB search
MWEIEESKKTLNFGEDFVYRCKIMLPINSPLKGTIEGPWQKKVSLAKMSAALKCCRCLHE
MGELDDQLQPVGKESMNLDDHLCPPPVDDQVPEGMPRPGTTKRRQYYYKKVADCLTGDQP
REELELFVYKLDMVLTCPIPDEQNTRGRKIYRPEQSTRSLGIVTTKPISKVSGFPVFTRS
GEVVIRIKEIGSNVRMTKDQLMSLQCFHKFTFTHVLRLEKYPIKFDPTNAKTAFYIVPLN
KFVGYEGIDWDFIKEIEMEGDPRPVPPEDAARKKFHFEHGLYEDAVVMPWYRNQDQPQYF
YVAEICTHLNPQSDFPDAGFETFEKYYLTKYGLQICNLSQPLLDVDHTSGRLNLLTPRHV
NRKGVALPTTSEETKRAKRENLQQKQILVPELCTIHPFPASLWRKAVCLPTILYRINALL
LADQLRLCVAREVGLGLEVLPQDFDWPPLDFGWSLADVLKKNQENQQQQQQQESFEKANE
SNTNKQMKKKLESPTDSSPTPSKKKITKNGIDMEIGTWSNDMAVDPPTPPFDMSADMSTA
DDFEIDTFDPNVALPDNLTLLDGFTANDDVEGELGADWGTGITERRSKSGCHKESGEVFR
VGSPSNFEADGWDMFSGPENSYGGYGAYDAYGGYGDFQGLADDLEGCESDVSSDMEDDDK
SQIDKWDEEGSKGRSGLVADEGSSDEEVDLHWPFCDDDSIRIAKETEFQKYLDEKYESIL
SSSSYLSESDPLVIEKTFRKNVSDNKVTTCKDVASVTKSTFQGCEQKVSKGCDNAQLSTS
TVALTVNRTQTLTISIRDVGVEISAWENDNNEIQFSFDFQPDLLNHPGPSPSVILQALTM
SNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLSYLRSKQVSNLNLYRLGKRK
GLGECMVATKFEPHDNWLPPGYFVPRELEEALIDSGVPAGHWNMADLPGLHDLASDEIRR
LVQERSEQIKRSKNEQVTTELMATQNPHDLPIFIPYNLLTQHSIPDKSIADCVEALIGAY
LTTCGPRGALLFMSWLGIKVLPYKIEKGLASEEIIYGHLDPPQSPLHHCPVVETEKQLEL
LLSGYKVFEEKIGYHFRDRSYLLQAFTHASYYKNRLTDCYQRLEFLGDAVLDYLITRHLY
EDKRQHSPGALTDLRSALVNNTIFASLAVKYDYHKYFRHFSPGLDRVVRDFVKMQEENGH
KINEEYYFMEEDECEAAEDIEVPKALGDVFESVAGAIFLDSGRSLDAVWTVYYKMMCREI
EQFSGVVPKSPIRELLEMEPETAKFGKPERLVDGKVRVSVEIFGKGSFSGVGRNYRIAKS
TAAKRALRHLKKLQMIANQGV
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaaatagaggagtcaaagaaaactcttaactttggagaagactttgtttatcga
tgtaagataatgcttccaatcaactctcctctgaaaggcaccatagagggtccgtggcag
aagaaagtatctctagcaaaaatgtcagctgctcttaagtgttgtcgttgccttcatgaa
atgggcgaattagatgaccagctacagccagtaggaaaagaaagtatgaatttggacgac
cacctttgtccaccacctgtggatgatcaagttccagaagggatgccccgtcctggtaca
accaaacgccggcaatattattacaagaaggttgcagactgtttaactggtgatcagcca
agagaagagttggaattatttgtatataaattggatatggttctgacttgcccaatccca
gacgagcagaatacacgtggacgcaaaatttaccgtcctgagcaatctacacgatcactt
ggtattgtaactacaaaaccaatatctaaggtcagtggattcccagtgtttacaaggtct
ggagaagtcgtcattcgtattaaagagattggcagtaatgttcgcatgacaaaggaccag
ttgatgtccttgcagtgtttccacaaattcacctttactcatgttcttcgactggaaaag
taccctatcaagtttgatcctaccaatgctaaaactgcattttacattgttcccttaaac
aaatttgttggctatgagggaatcgactgggatttcataaaagagatagagatggaaggt
gacccaagaccagttcctcctgaggatgcagccaggaaaaaatttcattttgagcatggt
ctttatgaggatgcagttgtcatgccatggtatcgaaaccaagatcagccacagtacttc
tatgttgccgaaatctgcactcacctcaacccacagagtgattttccagatgctggattt
gaaacttttgaaaaatattatttaactaagtatggccttcagatatgtaacttgagccag
ccgctactggatgtagatcacacatctggtcgacttaatctcctcactcctaggcatgtt
aataggaaaggtgtagcactccctaccacatcagaagaaaccaagagagcaaaacgtgag
aatttgcagcagaagcaaatcctggtacctgaattatgtacaatacatccattccctgct
tctctttggcgtaaagctgtgtgtttacccacaatattgtaccgaatcaatgcattactt
cttgctgatcaactccgtttgtgtgtagcacgtgaagtgggtcttggacttgaagttcta
cctcaagattttgattggcccccattagattttggatggagtcttgctgatgtcttaaag
aagaaccaagaaaatcaacagcagcaacagcagcaggaatcttttgaaaaagcaaatgaa
agcaacaccaataagcagatgaagaagaaactggaatctcctacagattcttctcctact
ccttcaaagaaaaaaatcaccaaaaatggcattgacatggagattggcacttggtcaaat
gacatggctgtggacccaccaacaccaccttttgatatgagtgctgatatgagcacagct
gatgattttgagatagacacttttgatcctaatgttgctttaccagataacctaaccctg
ttggatgggtttacagcaaatgatgatgttgaaggagagttaggtgccgattggggcact
ggtattactgaacgtagatccaaaagtggatgccacaaagagagtggcgaagtattccgt
gtgggttctccatctaattttgaagctgacggttgggatatgttcagtggtccagaaaat
agttatggtggttatggagcttacgatgcatacggtggctatggagacttccaaggctta
gctgatgatttagagggctgtgagtctgatgtttcttcagatatggaagatgatgacaag
agtcaaattgacaagtgggatgaagaagggagcaagggtcgctctggactggttgctgac
gaggggtcatcagatgaagaggttgatttgcattggcctttttgtgatgatgacagtatc
aggattgccaaggagacagaattccagaaatacctagatgagaaatatgaatcaatattg
tcaagttcatcttatttgtcagagagtgacccattagtgatagaaaaaacattcaggaag
aatgtgagtgataataaagtcacaacatgcaaggacgttgcatccgttacaaaatctaca
tttcaaggctgtgaacagaaggtttctaaaggctgtgataatgctcaactatctacctca
actgttgctctgactgtgaatcgcacacaaaccctcaccatttccatacgggatgttggt
gttgaaatatccgcatgggaaaatgacaataatgagattcagttcagttttgactttcaa
ccagatctcttgaaccatccaggaccttctccaagtgttattctgcaagctttaaccatg
tcaaatgcaaatgatggggtcaatctagaaaggttagaaactattggagattcatttctc
aaatatgccattaccactttcctgtattgtacatatcctcagcgccacgaaggcaagctc
agttatttacgctcgaaacaagtcagtaatcttaatttgtatcgtttaggtaagaggaag
ggcttgggagaatgtatggttgctacaaagtttgaaccccatgataactggttgccccct
ggatattttgtccctcgtgaattggaggaagctctcattgactctggagttcctgctggt
cattggaatatggctgatttaccaggattacatgatttagctagtgatgaaataagaagg
ttggtacaggaacggtcagagcaaatcaaacgaagcaaaaatgaacaagttaccactgag
ttaatggcaacacaaaatcctcatgacctccccatcttcatcccatataatttattaaca
cagcatagtatccctgacaaaagtattgcagattgtgttgaagctttaatcggtgcttat
ctgactacttgtggtccacgtggtgctttattgttcatgtcatggttagggatcaaggtg
ctgccatataaaattgaaaaaggtttagcaagtgaagaaatcatttatgggcatttagat
ccaccacagtcaccacttcaccattgtccagttgttgaaacagagaaacagttggagcta
ttactgagtggatataaagtctttgaggaaaaaattggctaccattttcgtgatcgctca
tacctcttacaagcctttacacacgcttcatattataagaaccgtttgacagactgctat
cagaggttggagttcttgggggatgcagtactagactacctaataactcgacacctttat
gaagataagcgacagcattcacctggtgctttgacagatctacgatctgctctcgtcaac
aacactatttttgcctcgctagcagtaaagtatgactatcacaaatacttccgtcatttt
tcgccaggcttagaccgcgttgttagggattttgttaaaatgcaagaggagaatggtcat
aaaataaatgaagagtactacttcatggaagaagatgaatgtgaagcagcagaggatata
gaagtccccaaagcacttggagacgtgtttgagagtgtagctggagccatatttcttgat
tctggtaggtctctagatgctgtatggacagtttactacaaaatgatgtgccgagaaata
gagcagttcagtggagttgtgcccaagtctccaattagagaattattagaaatggaacct
gaaactgccaaatttggcaagcctgaacgacttgttgatggaaaagttagggtatctgtt
gagatttttggaaagggttcattttctggcgttggccgtaattaccgcattgctaaatct
accgcagcaaagcgagcactcaggcacttgaaaaagctgcagatgatagccaatcaaggt
gtgtaa
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