Macrobrachium nipponense (oriental river prawn): 135215721
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Entry
135215721 CDS
T09903
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135215721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnz03041
]
135215721
Enzymes [BR:
mnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135215721
Spliceosome [BR:
mnz03041
]
Complex A
U2 snRNP components
U2 related factors
135215721
Complex B
135215721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
Motif
Other DBs
NCBI-GeneID:
135215721
NCBI-ProteinID:
XP_064106750
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All DBs
Position
19:complement(32129460..32185076)
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AA seq
1041 aa
AA seq
DB search
MSRDSRRKRSRSRSRTPDRRRSRSRDRERDQRRSRRSRSRDRHRSRSRDRRRSRSRDRRS
RSRDRSRSRDRDRDRRSRSRDRDRKRSRSRSRDRDRDRKRSKRSKSKSPARAKAVPVPVQ
HVEPAAPEPTEDEETGLDFDPSKIDKEEAEKRLEAEMQKRRERIEKWRAEKKKKEVEIAK
KEAEKGTLGANVPKVSMKTWSLEDDEEEDDGESKDNEAKAEQEDEVDPLDAFMSGIQEEV
RKINRGSIAHSTKPMTGTVENKIGIAKKPVIIMGMAKKVDAKKKGELMEQNQDALEYSSE
EESEDLKDAMANINSKGRKDLVKIDHSSIQYVPFRKDFYVEVPEIANMTKEEVESYRAEM
EGIKIKGQGCPKPIKTWAQCGVSKKILDILKKNGYEKPTPIQVQAIPAIMKGRDVIGIAK
TGSGKTLAFLLPMFRHVVDQPPLEDTDGPIAIIMTPTRELCMQIGKECKKFAKNSPRVCC
VYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDLG
FEPQVMRIIENVQPGRQTVMFSATFPRQVEALAKKILTKPIEIMVGGRSIVCKDVTQEVI
LLDEDQKFLKLLEILGQFYERGQIIIFVDKQESADTLFKDLVSHSYRALVLHGGVDQIDR
DSTIADFKSGRVPILVATSVAARGLDVKQLILVVNFDCPNHYEDYVHRCGRTGRAGNKGW
AYTFVTFDQPRYSGEVIRAMELSESPVPADLQKFYNDYKQKMEGEGKKVKTGGGFHGKGY
KFDETEANFASEKKKFEKAALGLADSDDEDIEQDIDQQIESMLNTKRIVKEIKVTPVVTT
AKEDATRGLNLTSGSASDKLELARRLAQRINLQHNIGKEAKGATQQAAESILKGDASIQP
TISAKTVAEQMAQKLNNKLNYQPRDDHEDEEENPEETQHKYEEELEINDFPQQARWRVTS
KEALAQISEYSEAGITVRGTFCPAGKNPPEGERKLFLAIESTSELAVSKAKAEIIRLIRE
ELVKLGTSAGPIKAQGRYKVL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgagatagccggcgcaaaaggtctcgcagtcgctcgcgtactcctgaccgtagg
agatctcgttcaagggatagggaaagagatcagaggcgatctcgtaggtctagatcaaga
gatcgtcacagatctcgcagcagagataggcgaaggtcaaggtctcgtgataggcgctct
cgatctagggacagatcaaggtctcgagacagggatcgcgataggagatccagatcacgt
gatagggaccgcaagagaagcaggagtagatcccgagacagagatagggatcgaaagagg
agtaagagaagcaaatcaaaatcgccagcaagagccaaggccgtccctgtccctgttcag
catgtggagccggcagctcctgaacccactgaagatgaagaaactggcttggactttgat
ccatcaaaaattgacaaagaagaagcagagaagcgtttagaagcagaaatgcagaaaaga
agagaacgaattgagaaatggcgagcagagaagaaaaagaaggaagttgaaattgctaaa
aaggaagctgaaaaggggaccttaggagcaaatgttccaaaagtttcaatgaaaacttgg
agtttggaagatgatgaggaagaggatgatggtgaaagcaaagacaatgaagcaaaagct
gaacaagaagatgaagtagatcctttggatgctttcatgtctggcatccaagaagaagta
agaaaaatcaatagaggaagcatagctcattcaacaaagcctatgactggtacagttgaa
aataaaattggtattgccaagaaacctgttattattatgggtatggctaagaaagttgat
gcaaaaaagaaaggagaacttatggaacagaatcaagatgcccttgagtattcttctgaa
gaagagagtgaggacctaaaggatgcgatggcaaatataaactcaaagggacgaaaagat
ttggtgaaaattgatcattcttctattcagtatgttcctttcagaaaagacttttatgta
gaggtacctgaaattgccaacatgactaaggaggaggttgagagttacagagcagaaatg
gaaggcatcaaaataaagggtcagggatgtccaaaaccaataaaaacttgggctcagtgt
ggagtcagcaaaaaaatattggacattttgaagaaaaatgggtatgaaaaacctacacca
atacaggttcaggctatcccagctatcatgaaaggtcgtgatgtcataggcattgccaaa
acaggttctggaaaaacactagccttcctattacccatgtttcgtcatgttgttgatcag
ccacccctggaagatactgatggacccatagcaattatcatgacacctacacgagaactg
tgtatgcagattggtaaggaatgtaagaagtttgctaaaaatagtcctcgtgtctgttgt
gtgtatggtgggactggtatatcagagcagattgctgaattgaagaggggagcagaaatt
attgtctgtactcctggcaggatgatcgatatgttagcagccaacaacggtcgagttacc
aacttacgcagggttacatatgtggtattggacgaagctgaccgtatgtttgacttggga
tttgaaccacaagtgatgaggataattgaaaatgtgcagcctggacgacagactgtcatg
ttttcagcaacatttccgcgtcaggtagaggcactcgcaaaaaagattcttacaaagcct
atagagattatggtcggaggccgttccattgtttgtaaggatgttacacaggaagtgatt
ctccttgatgaagaccagaaattcctcaagttgctggaaattctaggtcagttttatgag
agaggacaaatcataatatttgtagataagcaggaaagtgcagataccctctttaaagat
ctcgtaagccactcttatagagcattggttcttcatggaggggttgaccagattgatagg
gatagtactatagctgatttcaagtcagggagggttcctatacttgttgccacatctgtt
gctgccagaggtttagatgttaaacagctgattcttgtggttaattttgattgtcctaat
cattatgaggattatgtgcatcgatgtggtcgtacaggaagagcaggaaataagggttgg
gcttatacttttgttacatttgaccagcctcgatacagtggagaagtcatccgtgccatg
gagttgtcagaatcaccagtaccagcagatctgcagaagttttataatgattacaaacag
aagatggaaggtgaagggaaaaaggttaaaactggtggagggttccatggtaaaggttac
aagtttgatgagacagaagcaaactttgcatctgagaagaagaaatttgagaaagctgcc
cttggccttgcagattcagatgatgaagatattgagcaggatattgaccaacagattgag
agtatgttgaacactaaacgaattgtaaaggagattaaggtcactccagtagttacgact
gccaaagaagatgccacgagaggattgaaccttaccagtggttcagcatctgacaagcta
gagttggcacgtcgactggcccagagaattaatctccagcataatattggaaaagaggct
aaaggtgccacccagcaagcagcagaatccatcctcaaaggagatgcttcgattcaacct
acaatttcagccaaaacagtggcagagcagatggcacagaaacttaacaataagttgaat
tatcaacccagagatgatcatgaggatgaagaggaaaatccagaggagacacaacacaag
tatgaagaggagctggagattaatgattttccccagcaggccaggtggagagtgaccagc
aaagaggcattggcacaaatatcagagtattctgaggcaggtataacagtccgaggtact
ttctgtcccgcaggcaaaaatcccccagagggcgaacgaaaacttttcttggccattgag
tctacttcagaattggctgtgtcaaaagcaaaagctgaaattattcgtctgattcgggag
gagttggtgaagcttggcaccagtgctggtccaattaaggctcaaggacgctataaggtt
ttatag
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