Macrobrachium nipponense (oriental river prawn): 135216136
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Entry
135216136 CDS
T09903
Name
(RefSeq) vacuolar protein sorting-associated protein 35-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135216136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnz04131
]
135216136
Membrane trafficking [BR:
mnz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
135216136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
135216136
NCBI-ProteinID:
XP_064107287
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All DBs
Position
6:34213250..34369765
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AA seq
811 aa
AA seq
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MANEDTVDGMVSPMDDQDKLLDEAMGAVRGQAFQMKRCLDKGRLMDGLKHASNMLGELRT
SLLSPKTYYELYMCICDELRHLEMYLIDEFQKGHRVADLYELVQYAGNIVPRLYLLITVG
LVYIKTNETCKRDILKDLVEMCRGVQHPLRGLFLRNYLLQCCRNILPDIEDPSGGNSDDC
PSGSISDSIDFILMNFAEMNKLWVRMQHQGHSREKEKRERERQELRILVGTNLVRLSQLE
YVDVERYKKTVLPGILEQAVSCRDPLSQEYLMECIIQVFPDEFHLQTLSAFLKACAELHA
EVNVKNIIISLIDRLANFAHREDGTGIPEEIKLFEIFSEQVSQVIKSRPDMPLEDTVSLQ
VSLINLAQKCYPKEIDYVDKVLQNTLEVFQKLNIDKTAQSQGIHSGSALGKELSRLLRLP
ADNYNNLLTVLQLQYYTPLLGLLDYSGRKILSTYLVTNAVENETEIPTQEQVDAVLSMIA
SLICDQSDQPLVEPDPEDLAEEQGLLARFLHLFKSTNSDQQYLILTTARKHLGAGGNKRV
VYTLPPLVFQAYQLAFKYYKEREEDDKWSKKVHKIFQFSHQTITALVKAEYAELPLRLFL
QGALAIDKIDFENHETVAYEFMSQAFSLYEDEISDSKAQLAAMTLIMGTFQQTTCFTEEN
HEPLRTQCALAASKLLKKPDQARGVTICSHLFWSARSEATNKEELRDEKRVLECLKKAVR
IANQCMDPSAQIQLFVELLNHYIYFYEKGNTQVTVAMLNQLISKVKEDLANLETTEETDQ
ISRHLTNTLTHLELRLQEPSGEGPNYEGLQL
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgaggacacagtagacgggatggtgtcaccaatggatgaccaggacaagctc
ctggatgaggccatgggtgctgtcagagggcaagcatttcaaatgaagagatgcttggat
aagggacgcttgatggatgggctaaagcatgcctcaaatatgcttggtgaattgaggaca
tccctcttatcacctaaaacttattatgaactttatatgtgtatatgtgatgaactacgt
catttagaaatgtacctgattgatgaattccagaagggtcatcgtgtagctgacctttat
gaattggttcagtatgcaggaaacattgtaccaaggctgtatttgctgattacagttggc
ttggtgtacatcaaaactaatgagacttgtaaacgagacattttgaaagatctcgttgag
atgtgtcgtggtgttcagcatccccttcgtggtttgtttcttagaaactaccttcttcag
tgttgtagaaatattttaccagatattgaagatccttctggtggaaattcagatgactgt
ccatctggatctatttcagacagtatagatttcatattaatgaattttgcggagatgaac
aagctatgggttcgtatgcagcatcagggtcattcccgtgaaaaggaaaagagagaaaga
gagagacaggaattgagaattttagtgggcaccaacttagtgcggctttcacagcttgaa
tatgttgatgttgagcgctataaaaagacagtcttacctggaatcctagagcaagctgta
agctgtagagatcctttgtcacaagagtacttaatggaatgtataatccaggttttccca
gatgaattccacctgcagacattaagtgcattcctgaaagcttgtgcagagttgcatgct
gaggttaatgtcaagaacatcatcatatctcttattgacagattagcaaattttgcccac
agggaagatggaacaggcatccctgaagaaatcaagctttttgagatcttttctgaacaa
gtttctcaagtgataaagtctcgtcctgatatgcctctcgaagacactgtcagtttgcag
gtgtcactaattaatcttgctcagaagtgctatccaaaagaaatcgactatgtggataaa
gttttgcagaatactttggaagttttccagaagctaaacattgacaagacggctcagagc
caaggaatccactcaggatctgccctaggaaaggagctcagccgtctgctacggctccct
gcagacaactacaacaatctcctcacagtcttgcagctgcagtactacactcccctttta
ggtcttttagattatagtggaagaaaaatactcagtacctaccttgtcactaatgcagta
gaaaatgagactgagattcctacacaagagcaggttgatgctgtgctttccatgatagca
tcattaatttgtgaccagtcagatcaaccccttgttgaaccagatcctgaggacttggct
gaagagcaaggcctacttgcaagattcttgcatctgttcaaatcaacaaatagtgatcaa
cagtatctgattctgacaactgcacgaaaacaccttggagctggaggtaacaaaagagtg
gtatacactttgccaccccttgtgttccaagcatatcagctagctttcaagtattataaa
gaaagagaagaggatgataaatggagcaagaaagtccacaaaatattccagttcagccat
cagacaataactgctttggtgaaagctgaatatgctgaactaccactgaggctcttttta
caaggagcattagccattgataaaatagattttgaaaaccatgaaactgttgcatacgaa
tttatgtctcaggcattttctctgtatgaggatgaaataagtgacagtaaagcacaactg
gcagccatgacactcatcatgggaacattccagcagactacttgttttactgaagagaat
catgaaccattacgaactcagtgtgcattagcagcatcaaaactcttaaagaagccagat
caagccagaggggtcactatctgctctcacttgttttggtcagcccgttctgaagctact
aacaaagaagaactaagggatgaaaagagggttctagagtgcttgaagaaggctgttcgc
attgctaaccagtgcatggatccttctgctcaaattcaactgtttgtggagttattgaat
cactatatttatttttacgaaaaggggaatacacaggttactgtggcaatgctcaatcag
ttgatcagcaaggtaaaagaagacctggcaaacttagagacaactgaagaaactgaccaa
atatcgcggcatttgaccaacactttaacgcatttagagcttaggctacaggagccttct
ggagaaggccctaattatgagggcctacagctctag
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