Macrobrachium nipponense (oriental river prawn): 135216328
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Entry
135216328 CDS
T09903
Name
(RefSeq) rootletin-like isoform X1
KO
K16469
rootletin
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mnz03037
]
135216328
Cilium and associated proteins [BR:
mnz03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
135216328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
PUMA_CC
Crescentin
CENP-F_leu_zip
CENP-Q
ERM_helical
YwqH-like
ATG16
Motif
Other DBs
NCBI-GeneID:
135216328
NCBI-ProteinID:
XP_064107581
LinkDB
All DBs
Position
6:complement(4095080..4508266)
Genome browser
AA seq
2147 aa
AA seq
DB search
MKNYLECLWTSFLYDVSMRLSGSLGRHDSDLELLVREGEAVSTRLRNLLTHNLSSPRSAA
GGAGGVSASSRHRRAASTESPRHHSLERRAEGLTDGSSRLSRADLAFDDSTSPRHDRGYP
SSLPPRTRSLTDVRRPPATTSTPIKPDLTPPGGGSRIRRDLFPSSAGTATTTTTPLSVGH
LATSLTDTMDDPEMFRLEEETRYLQSEVGRLEEMLATSRAERDRVSVQYNVLTDHVADEW
QEYQKRLEYFHDVHRKQTSLIDRLANKVREYRSRNRELESRSTEALRYRDSNDREIETLN
LALTTAEEKLRASEAQHTFDLETALVKLEDEQHRCESFSTQVSNLQQQLAKVEGTLSQVT
EERDKAQQALKRLADEVKAKEEQWVNESQQFNKYYISEHKNLLDLWREIGSVKRTFSEVK
HLTSRDLTELRGDFDRYSHLLLSACQSAHSNMSIIPTGDKQDEYVVANPSDLWGRIQECE
RSQVRAETEKTNLKEKINELNSRIAELNNGLRDKERTITELNKKLDEGMSEAEIQETLRE
KVRTLEAYMVDIAQTVIKDSEQSTGDADGKTPSAFRIVRDSDQGIAPDLPQSTVSAVRTA
LSNRHIQIHELQLKLTSSKEQLAGLRKQYEVAESAQRSLEGTILELHDEMEALGRQKEEI
AREKDRLCEDLDAVTAEKSTLEKTKQTLKSQLEAAEEETERRARQVTELEKEKAALGEER
SYLNSKLMREKEEVQKHVNTITILNTELSSVQHQVTILSESLGKVRAAEEKLDQEKDELR
DQIRAMERYRTELEAKLAHSLRQETDLREALEKVESYSINLGQDKSQLVSKITSLETERA
ALGTERAELRTEIERLKDDLAVLEEERSSHETTINTLNEKITLLSIDKEKIELELNDIIT
ERNELHGQLTALERIKTSLENELTTITNNLTEKIKLIERLNGEKEGLTKENAEMEVKLNG
AEKELSALRENLTTLKAEKQSLESFATSLEKKWSNNEARRTQLEKENQNLTSDKERLNTQ
MNKLQRELEAELAKLRESRTALERRLDEKETEHKKTLMMLRNQYEEALDDIRKEKSNIQL
ELEDKLNSTIHSMKMERDELELKKDQEISALKRYSEKLQRERDDSTLRFEEEKHRSMMLA
QQEISSLEEKVAALQRDLSSYETQLEQLRRDGTSKAEAGRANEGALHNKITQLKEDLHNS
SQHFEKQLKDEKDTYERRIRELQARIDEARRDHEVEITSLKTDLRLAREDANRLQQDLED
AEGKLKEAEDTRVALKKELNRANEEMRSAEERRSNDLQALIRKVDVEKKDLQKRLDEKES
KLSALEVSEAKHADLITRMTAQLRDLNTVKQDARREISELKKKQQLSETEAVGRSQELEN
LRLRLSSEEDRHNECRKEANKLKTKVGEYERERDNLQTELALLERRLTELEDHHAAKEQE
LATSLEESRANERKLNDEKKNLENYLNNANQQISDLKVKLSREEGHVEALEQQLNTLDTN
RDQLERKLQNVYASLRTVTRMYQDTSPSSPALRSRKGTKIGFELSGSHSDLQASIEALGS
TEKINVAEIDPETVRHELRALMTQMNQVELERDDAMAHVTSLERQLSELQEAHQKSEARL
RDVTRALSELEEKKRYSDDKLNKAVSHASQQDEALRRKEIEIRSLNEELNNTRRRVTDLE
HEKGTLDDRVQKLKNGVNRIEMENADIKEKLRASEQRGALLDDSKSRLEAELSTTKKTVS
EKQMEIENLHSTKDNVNRTIRALEDQNLTLKNKVEDLKTRMAVISNSEAELKNKLSSINR
SLKESVSSSSNMQEELSRSQNQLSRSEGERRQLEEKVADLQSAIAELKRQKEQLSEFKTK
AQQDLSNAEIKNAELEMSLKSLKGNLGERSSATDELVAKVSRLEQEKFELQSKLNNLERK
LALSEAEKRDIEKTEYRIEKDKTDIKKILEKYEQDRHDRPDHHRSDTVILSGSEQSVHDS
NISALRVENMELRRKIDDLETSRTDLQQKHLKETLEMSSDHRRERQIDSEKIRRLTNQLE
ALRQEKERCELRIHSLEQQIAQYRDQIREYRSRSSAVAADVRRVRMSMTESLHNIGTHPR
ISAGVVDSEIQNLSSRQARSPRATRQRRYASASPGRRPDQRKTLTFT
NT seq
6444 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattacttggaatgcctctggacgagctttctttacgacgtctccatgcgtctg
agtggtagcttgggccgccatgacagtgacttggagttgctggttcgggagggcgaggca
gtctcgaccagacttcgcaacctattaacccacaacctctcgtctccgagatcagctgct
ggaggagcaggaggagtatccgcctcgtcccggcacaggagggcagcttccaccgaatcg
ccaagacaccattccctcgaacgccgcgccgagggcctgacggacgggtcatcgcgcctg
agtcgggctgacctcgctttcgatgactcgacctccccgaggcatgatcgaggttaccct
tcttcactgccgcctcgcacaaggtcactcaccgacgtcaggagaccaccagcaacaacc
agtactcccataaaaccggatttaacgccacctggtggcgggagccgaattcggagggac
ctcttcccttcgtctgctgggaccgccaccaccaccactacgcccctctccgtcggccac
ctcgccacctctctgactgacacgatggacgatccagagatgtttcgtttggaggaggag
actcgttatttgcagtcggaggtgggccgcctggaagaaatgctcgctacctcacgagct
gaacgtgacagagtatcagtccagtataatgttctgaccgaccatgttgcggatgagtgg
caagaataccagaagagattagagtattttcatgacgtgcataggaagcagacatctttg
atagaccggttagcaaacaaggtacgagagtaccgaagcagaaaccgggaacttgaaagc
agaagtactgaagccctacgatacagagacagcaatgatagggaaattgagactctcaat
cttgctcttaccacggcagaagaaaagttgagggcttcagaagctcagcatacttttgac
cttgaaacagcattggtcaaactagaggatgaacagcacaggtgtgaaagtttcagcaca
caagtttccaatttacaacaacagttggcaaaagtcgaaggtactctgtcacaagtgact
gaggagcgagacaaggctcaacaagctctcaagcgcttagccgacgaagttaaggctaag
gaggagcaatgggtcaacgaatctcagcaattcaacaaatattacatatcggaacacaaa
aacttacttgacctttggcgagaaatagggtctgtgaagcgcaccttctccgaggtgaaa
cacctgacctcccgcgacctgacagaactgcgaggtgacttcgaccgttattctcatctc
ctcttgtctgcctgccagtcagctcactccaacatgagtatcatacccacaggagataag
caggatgaatatgtggttgctaatccatcagatttgtggggtcgcatccaagaatgcgag
aggtcacaggtccgtgccgaaacggagaagaccaacctcaaggaaaaaatcaacgaactt
aattcgagaatagccgaactcaacaatggtttgagggacaaggaaagaacaataactgaa
cttaataaaaaattggatgaaggcatgtcagaagcggagattcaggagacactgagggag
aaggtgcgcacattagaagcatatatggttgacattgcacagaccgtcatcaaggattct
gagcagagcactggtgatgcagatggcaagactccttcagctttcagaattgtacgagat
tcagaccagggtatagcaccagatttacctcagagtactgtgtctgctgtacgaacagct
ctctcaaatcgtcacattcaaattcacgagctacagctgaagttgacatcatctaaagaa
caattggctggtcttcgtaaacaatatgaagttgcagagtcagcgcagcgatcccttgaa
ggaaccattcttgaacttcatgatgaaatggaagccctcggaagacaaaaagaagaaata
gccagagaaaaagatagactctgcgaggatttggatgcagtaacagctgaaaaaagtact
ttagaaaagactaagcaaactctcaaatcccagttggaggctgctgaagaagaaacagag
cggcgagcccgtcaggtaacagaattggaaaaggagaaggcagctcttggtgaagaacgc
tcctatcttaattcaaaactgatgagagaaaaagaagaggtccagaagcatgtaaatacc
atcacaattctaaacacagagctctccagtgttcaacatcaggttactatattgtctgag
tcattgggaaaggtacgtgctgctgaggagaagttagatcaggagaaagatgaattgcga
gaccaaatacgagcaatggaacgataccgcactgaattggaagcaaaactggctcactcc
ctacgtcaggagactgaccttagggaggcccttgagaaggttgaatcttacagcatcaac
cttggccaggataaatctcagctggtctccaagatcacatctcttgaaacagagcgtgca
gccttggggactgaaagagcagagttacgtacagagattgaacgactcaaggatgatttg
gctgttttagaggaagaacgatctagccacgagactactattaacacattgaatgaaaaa
attacacttttatcaattgataaagaaaagattgaactggagctgaatgacatcatcaca
gaacgaaatgagttacatggacaacttacagctctggaacgtattaagacttcattggag
aatgagcttaccaccatcaccaacaacttaactgaaaaaatcaagttaattgagaggctc
aatggtgaaaaggaaggactgaccaaagaaaatgctgaaatggaggtgaaactgaatggg
gctgagaaagaactaagtgccctacgtgaaaaccttacaacgctgaaagcggagaaacag
agtcttgaaagttttgcaacatctttagaaaagaagtggtcaaataacgaggctcgtcgc
actcagctagagaaggagaatcaaaatttgacatctgataaggagaggctcaatacccag
atgaacaaattacaacgggaacttgaggcagagctggctaaactcagagagtcacgaaca
gcacttgagcgacgattggatgagaaggaaactgagcataaaaagacacttatgatgctt
cgcaaccagtatgaagaagctttggatgatattagaaaagaaaagagtaacattcaactg
gaacttgaagacaaattgaattcgaccatccactccatgaaaatggagagagatgagctt
gaactcaagaaagatcaagaaatatcagcactgaagcgttactctgaaaagctacagcga
gaaagagatgattcaactttgcgttttgaagaggagaaacaccgctcaatgatgctggct
cagcaagaaatatcaagtctggaggaaaaagttgctgcattgcagagggatttgtcttca
tatgaaacccaactggaacagcttcgacgggatggcacctccaaggctgaagctggcagg
gctaatgaaggagcattacataacaaaattactcagctaaaagaagatttacataacagc
agccaacactttgaaaagcagctaaaggatgaaaaagacacgtatgagcgtagaatacga
gagctccaagcacgaatagacgaagctcgcagggaccacgaagtagaaattacatccttg
aagactgacttgagattagccagagaagatgcgaatcggctccagcaggacctggaagat
gctgaagggaagcttaaagaagcggaagatacaagggttgctcttaagaaagaactcaat
cgagcaaatgaggaaatgaggtctgcagaagaaaggagatctaatgacttacaggctctg
atcaggaaggttgatgtcgagaaaaaggacttgcaaaagcgacttgatgagaaggaatcc
aaactgagtgctttagaggtctctgaagcaaagcatgccgacttgataacgcgtatgaca
gctcagttgcgtgatttgaatactgttaagcaagatgcacgaagagaaataagtgagctc
aaaaagaagcaacagctctcggagactgaagctgtgggtcgtagtcaggagttggaaaat
ctaagacttcgattgtcatcagaagaagaccgtcacaatgagtgcagaaaggaagctaac
aaactaaaaactaaggttggagagtatgaacgagaaagagacaatctccagacagagtta
gcgcttttagaacggaggttgacagaacttgaagatcatcacgcagcaaaagagcaagaa
cttgccaccagccttgaagaatccagagcaaatgaacgaaaactcaatgatgaaaagaag
aaccttgagaactatctaaacaatgccaatcaacaaatcagtgacctaaaggtcaagctg
tcccgtgaggaaggacacgttgaggcacttgaacagcagctgaatacattagacacgaat
cgtgatcagttggagaggaagttgcagaatgtttatgcttcgctgcgtactgtgacacgc
atgtaccaggacacctcaccatcttcgcctgcgctacggagcaggaagggcaccaagatt
ggtttcgaactgtctggtagccatagtgatttacaagcatccatagaagctcttggatcc
actgaaaaaattaatgtagcagaaattgaccctgaaacagtgcgccatgaattacgagct
cttatgacacagatgaatcaagtggagttagagagggatgatgccatggcacatgttact
agccttgagagacaattatcagaacttcaagaagctcaccagaaatcagaagcacggcta
agagatgtaactcgggctttgtcagagttggaagagaagaaacgttacagtgatgataag
ctcaataaggcagtgtcacatgctagccagcaggatgaagctttgcgtcgaaaggaaatc
gagatccgttccttgaacgaagagctaaataacacgaggagaagggtgaccgaccttgag
catgagaaaggaactcttgatgatcgtgtgcaaaagctaaagaatggtgtaaatcgaatt
gaaatggagaatgcagacatcaaagaaaaattaagagcctctgagcaacgaggtgctctt
cttgatgattccaaatcaagattagaagctgagcttagtacaactaaaaagactgttagt
gaaaaacaaatggagattgagaatcttcactctacaaaagataatgtgaaccgtaccatt
cgtgcacttgaggaccaaaacttgactctcaaaaataaagtcgaagatctgaagactaga
atggcagtaatttctaactctgaggcagaattgaagaacaaactctcatccatcaaccga
tctttgaaggagtcagtgtcatcatctagtaacatgcaagaagaacttagcaggtctcaa
aatcagttatcacgaagtgaaggtgaacgtcgtcagttggaggagaaagttgcagatttg
cagagtgcaattgcagaattgaaacgccagaaagaacagctatcagagttcaaaactaaa
gctcagcaagacctctcaaatgcagagataaagaatgctgaattagaaatgagcttgaag
tctctgaaagggaaccttggagagcgatcatctgcaacagatgagcttgtcgcaaaggtc
tcccgattagagcaggagaagtttgaactccagagtaagcttaacaatctggagaggaag
ttggccctaagtgaagcagaaaaacgtgatattgaaaagacagaatataggattgagaag
gataaaactgatataaagaagatattggaaaagtatgaacaagatcgtcatgatcgtccg
gaccaccatcgttccgacacagtgattctgagtgggtctgaacagtctgtgcacgactct
aatatcagcgctcttcgtgttgagaacatggagctgcgcagaaagattgacgacctagaa
acctcaaggactgatctacagcagaaacatttgaaggagactttggagatgagcagcgac
catcgccgagagagacagattgacagtgaaaagattcgtcggctgactaaccagttggaa
gccctcagacaagagaaggagcgttgtgaactgagaattcattcgcttgaacaacagatc
gcccagtatagagatcagataagggagtaccgaagtcgtagttctgctgtcgcagctgat
gttcgaagagtacgcatgtctatgacagaatcattacacaatattggcacacatcccaga
atctcagctggcgtagttgattctgaaattcagaacctatcaagtaggcaagcacggtcg
ccgagggcaaccaggcaacgtcgttatgcgtcggcatcaccagggcgcaggcctgatcag
aggaagaccttaaccttcacatga
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integrated database retrieval system
