Macrobrachium nipponense (oriental river prawn): 135216611
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Entry
135216611 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 5-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
135216611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnz03400
]
135216611
DNA repair and recombination proteins [BR:
mnz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
135216611
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GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Motif
Other DBs
NCBI-GeneID:
135216611
NCBI-ProteinID:
XP_064108061
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All DBs
Position
6:complement(114985437..115172787)
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AA seq
644 aa
AA seq
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MDDEEGVKRAWEEPVRGRRLRGRQRIRCEVRFSGKKIVLFTDFSSEFSDDQTSAIIAGLC
NQGISLNIIGPEILDDSADDSGNDDGAGPSNGLQPFKNGVRTVPQNWNGKPKTVVQLAGE
KVATRLVAEADGGMYSFEDAIPQLIFFEKRSAGSANWNTLLEIGPSFQIAITGRIKIKHS
TVPTWKTAYASDESAVIIKETSFHRKDDTETPVDEDEVIPGYKYGTTLVPFIDEDSQMKY
SSNTPRCLSILGFTRRSNVPHQFWAGEQVLVITGREGDEAAAVALSSFIHALEVLDYVGI
TRRIYNKNSDPVLGALFPDITKDYECLIWIPLPFQEDVRSYSFPSLCKTTEKLTESEKQA
MDNLITAMDLTVVNEDDGDGSREELLEPSECXTPQLQHYCNALTHRAIYEDGPIPAPVDH
VINILKPPEEVIDGRDECAKKLIPLFPTKKIMKKSKRDNGDLFVSNEDESNKKLKSEDGD
DTLTSSDLTRAHVTKITTASPTEDFYALLKGEAPNFTLICSQMRDIILQLVDSWSQGSAS
SEAVLSRVIDCLTAFRKESSLIDPSLYNDLMPSLKSAVISGSIQHLWNRVKEGNLGLVTT
EESLKSSVSTAAASAFFELEAEPQQEVSEPKHEEDDVEDLLDDL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaggagggagtgaagagggcttgggaggaacctgttagaggaagaagatta
agagggaggcagagaattagatgtgaagtgagattcagtggaaaaaagattgtgctgttc
acagacttcagtagtgaatttagtgatgatcagacatcagcaataattgcaggcctttgc
aatcagggtatctcgcttaatataattggtccagagattttggatgacagtgctgatgat
agtgggaatgatgatggcgctggaccaagtaatgggttgcagcctttcaaaaacggtgtg
cgaacagttcctcagaattggaatgggaaaccaaagactgttgttcaacttgcaggagag
aaagttgcaaccagattagttgcagaggcagatggtggtatgtatagttttgaagatgcc
attccacaattgattttctttgagaaacgatcagctggtagtgccaattggaatacactg
ttggaaattggtcccagtttccaaattgccattacagggagaattaagattaaacattcc
acagttcctacgtggaaaacagcgtacgcatctgatgaaagtgcagtcattattaaagaa
acttcattccaccgaaaagatgatacagaaactcctgtggatgaagatgaggttatcccc
ggatataaatatggaacaacattggtaccattcatagatgaggactctcagatgaaatac
tcctctaataccccaagatgtttaagcattcttggctttactcgtagatccaatgttcct
catcagttctgggcaggagaacaagttcttgtcataactggtcgagaaggagatgaggca
gcagcagttgctctatcttcctttattcatgccttagaagttcttgattatgtggggatt
acccgtaggatctacaacaaaaacagtgaccctgttcttggtgccctctttcctgacatt
acaaaagattatgagtgcctcatttggataccattacctttccaagaagatgtaagatct
tactcattcccatctctttgcaaaacaacagaaaaattaacagaaagtgaaaaacaagca
atggataatctcataactgctatggatctcacagtagtgaatgaagatgatggagatgga
agtagggaagagttgttggagccatcagagtgttaaaccccacagcttcagcattactgt
aatgctttaactcacagagctatttatgaagatgggcctattccagcacctgtggatcat
gtcattaatattttaaagccaccggaagaagttattgatggaagagatgaatgtgctaaa
aagttaatccctctattccctaccaagaaaataatgaagaaaagcaagagagacaatgga
gatttgtttgtcagtaatgaggatgagagtaacaaaaagctcaagtctgaagatggtgat
gacactttgaccagcagtgatttgacgagagcccatgtaacaaaaataaccacagctagt
cccactgaagacttttatgcacttctgaaaggagaggctccaaatttcactttgatttgc
agtcagatgagagacatcattctacaattggtagacagttggagtcagggtagtgcatcc
agtgaggctgtgttatccagagtcatagattgcttgacagcctttagaaaagaatcatcc
cttattgatccttccctttacaatgatcttatgccttctctcaaaagtgctgttataagt
ggatctattcaacatttatggaacagagttaaagaaggaaaccttggattagtcaccaca
gaggaaagcctaaaaagttctgttagtacagcagccgcaagtgcattctttgaactggaa
gcagaaccacaacaggaagtatcagaaccaaagcatgaggaagatgatgttgaggattta
cttgatgacctttaa
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