Macrobrachium nipponense (oriental river prawn): 135217360
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Entry
135217360 CDS
T09903
Name
(RefSeq) ATP-dependent RNA helicase DDX54-like
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mnz03009
]
135217360
Enzymes [BR:
mnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135217360
Ribosome biogenesis [BR:
mnz03009
]
Eukaryotic type
Pre-60S particles
Helicases
135217360
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
PSDC
Motif
Other DBs
NCBI-GeneID:
135217360
NCBI-ProteinID:
XP_064109270
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All DBs
Position
7:10201389..10399127
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AA seq
835 aa
AA seq
DB search
MSEELLGWGEVSTPLEENFEDEIDIKKFRTQRNRRENKKGGAFQMMGLSKPVFKGVMKKG
YKVPTPIQRKTLPLVLMGRDVVAMARTGSGKTACFLIPMFEKLQEHTAKTGARALILSPT
RELALQTLKFTKELGCFMNLRAAVILGGDNMDGQFYALNENPDILIATPGRLAHLIVEMN
LKLKTIQYVVFDEADRLFEMGFAEQLNSIVKCLPEQRQTLLFSATLPKMLVEFARAGLSD
PVLIRLDVEHKLSENLKMTFFKCKSEDKLALLLHLLQHVIKKKEQTIIFAATKHHVEYLH
NALDMAKIPNTYCYSSLHSVARKINVAKFQTKKVQCLIVTDVAARGIDIPMLDSVINYHF
PAKSKLFIHRVGRVARAGRSGTAYSFVAPDEAAYFMDLHLFIGKDVRFAPHPPDKNKKDD
WDGLYGSVPQTVIDAELEQILSMHEKSSELADMKTTMDSAYKQYSKSRPPPSKESIKRMK
EDEWLMTVGYHPLLIKANVELEDERLAMLERLKNLQPKETVFEMSKNRHDKQSIVYCNMK
EKREYDEHKIKSFHRDLEMRRMAKQEMEVSAQKAREDICKLQQSTEEEISDAFSSVVTSD
KNKKSESTKEFNGVDRQNGDNLKRKGASGGEPKPKKKKNQNADQVFKDEEFYIPYAHEGR
HTEEGYSLQSGFHKDTDQATLDMLDDDDVNQRKKKALHKWNRYSKKFVSTQEKNKKIKTE
SGVWISASYKTGRYEKWLAKGKKKDSENDDGNQRSGRKGMGIKTINIRAHSSAHPLYNKL
KGPAQRRPPRRELRTEQEIVKETARIESERMKHKVGRERAAAKRKGKGIKGKRRR
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaactacttgggtggggggaggtaagcactccccttgaagagaattttgaa
gatgaaattgacataaagaaattcagaacccagaggaatcggcgagagaacaagaaaggt
ggagcctttcaaatgatggggttaagtaaaccagtgtttaagggagtaatgaaaaaaggt
tacaaagtcccaactccaatccagcgtaagacattgcctctggttttaatgggtagagat
gttgtagctatggcaaggacagggagtggaaaaactgcatgttttctcataccaatgttt
gaaaaattgcaagaacacacagcaaagactggagcccgtgctctcatcctatccccaaca
cgggaattagctttgcagaccctaaagttcaccaaagaactaggctgttttatgaatctg
cgagcagctgtaattcttggaggggataatatggatggtcagttttatgcactgaatgaa
aatcctgacattcttattgcaacacctggaaggttggctcatcttattgtcgaaatgaac
ctgaagctcaaaacaatacagtatgttgtctttgatgaagctgatcgtctttttgagatg
ggttttgcagagcagttaaatagtattgtgaagtgtcttccagaacagcgacaaaccctg
cttttttctgctactcttccaaaaatgcttgttgaatttgctcgagctgggctcagtgat
ccagttcttattcgtttggatgttgagcacaaactgtcagagaatttgaaaatgactttt
ttcaaatgtaaatctgaggataaattggcgttgcttctacaccttctgcagcacgttatc
aagaaaaaggagcaaacaatcatctttgcagcaacaaagcatcacgtagaatacttgcat
aatgcattagatatggcaaaaataccaaacacatactgctactcatctctacattcagtt
gcaaggaagattaatgttgctaagttccagaccaagaaggtgcagtgccttatagtaact
gatgtagcagcacgtggtatagatattcccatgctggacagtgtcatcaactaccatttt
ccagctaaatcaaagctgtttatacatagagttggtcgagttgctagagccggacgttca
ggaacagcatattctttcgttgctcctgatgaagcagcttatttcatggacctccatcta
tttattgggaaggatgttcggtttgctccacatccaccagataagaacaagaaagatgat
tgggatggtctgtatggatctgttcctcaaactgtcatcgatgctgaattagagcagatt
ttgagtatgcatgaaaaatcatccgaactggctgatatgaagacaactatggacagtgca
tataagcagtacagcaagtcaagaccacctcctagtaaagagagcattaaaagaatgaag
gaagatgaatggctaatgacagtaggataccatcctcttttgattaaggctaatgtagaa
ttggaagatgaacgattagccatgttggaacgtctgaagaacctccagcctaaagaaact
gtgtttgagatgagtaagaatcgccatgataagcagtcaattgtatattgtaatatgaag
gaaaagagggaatatgatgaacacaagattaagtctttccatagagatttagaaatgaga
cgaatggcaaaacaagaaatggaggtatctgcccaaaaggcaagagaggatatatgtaaa
ctgcaacagagcacagaagaagagataagtgatgcattttcttccgtagtgactagtgat
aagaataagaaaagtgaatctacaaaagagtttaatggagttgatcgtcaaaatggtgat
aatttgaaaaggaaaggagcttcaggcggcgaaccaaagccaaagaaaaagaaaaatcag
aatgcagaccaagttttcaaagatgaagaattttacattccctatgcacatgagggtaga
cacactgaagaaggatattctctccagtcaggttttcataaggatacagatcaggcaacc
ttagatatgcttgatgatgatgatgtgaatcaaagaaagaagaaagctttacacaaatgg
aatcgatattcaaagaagtttgtcagtactcaggaaaaaaataaaaaaataaaaactgaa
tctggtgtgtggatttctgcatcttacaaaactggtaggtatgagaagtggctagcaaaa
ggcaaaaagaaagattcagagaatgacgatggaaatcagaggtcaggcagaaaaggaatg
ggcatcaaaacaattaatattagggctcacagcagtgctcatcccttatacaataaactg
aaaggaccagcacaaaggcggccacctaggagagaattgagaaccgaacaagaaattgtt
aaggaaactgccaggatagaatcagaacgcatgaaacacaaagtgggtagagaaagggct
gcggctaaaaggaaaggtaaaggaattaaaggtaaaagaaggagataa
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