Macrobrachium nipponense (oriental river prawn): 135218257
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Entry
135218257 CDS
T09903
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135218257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnz03041
]
135218257
Spliceosome [BR:
mnz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
135218257
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
135218257
NCBI-ProteinID:
XP_064110499
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Position
9:13185488..13193120
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AA seq
513 aa
AA seq
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MSLADELLNDFDDGEEEELLVNELQARGMDYSSNGVKESIAETTNDTNGESEFKVPLPVD
GPVPKAGLQSVRQVALLWDSDKLKNIKDRIDKYAITPRKAEELQGPVEADPEYMLIVDAN
NINVDIDDEINTIHKFVKEKYAKRFPELESLVVNPLEYLNAVRELGNDVDKIKNSEALAQ
ILTQATIMVVSVTASTTQGTLLTKEELNAIEEACKMAQDLNAFKIRILDYVESRMNFIAP
SISCIVGASTAAKLMGAAGGLTNLAKLPASNVLLIGKQKKTMIGMAQTSMLPHAGYIYYS
DIVQEAPVDLRAKVARIVAAKTTLAARIDSMHGSPNGTQGIRLREEVEKKLDKLQEPPPV
KSVKPLPPPIDAPGKKRGGRRVRKMKERMAVTDLRKAQNRMNFGEIEEDAYQDDLGYTRG
QLGKGGAGRIRKVTVDEKTRVRLSKTLQKEVQRQSSLGGQTTVRRQVAGTASSVAFTPLQ
GLEIVNPQAAENNSQGQGNKYFSNILGFKNVSK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagcagacgaacttctcaatgacttcgacgatggcgaggaagaggaattactg
gttaacgagttgcaagcgagggggatggactacagcagcaatggggtgaaagagagcatc
gcagagacgaccaacgacaccaatggggaaagcgagttcaaggtgccccttcctgtcgat
ggccctgtgcccaaggcaggtttgcagtccgtgaggcaagtggcgttgttatgggattca
gataaacttaagaacattaaagatcgtatcgataaatacgccataacgcccaggaaggcc
gaagagctgcaggggcctgttgaggcagaccccgagtacatgttgatcgttgacgccaac
aacatcaacgtcgacatcgacgacgaaatcaacaccattcacaagttcgtgaaggaaaaa
tatgccaaaagattcccggaactggaatctttggtcgtgaaccccctggaatacttgaat
gccgtgagggagctgggcaacgacgtcgacaaaatcaagaacagcgaagccctggcgcag
atcttgacgcaggccaccatcatggttgtcagtgtcactgcctccaccacccagggcact
ctgctgaccaaggaggagcttaatgccattgaagaagcgtgcaagatggctcaagatctg
aatgcgttcaagattaggatactggattacgtcgaaagtcgaatgaacttcatcgcacct
agcatatcgtgcattgtcggggcgtcaactgctgcaaaattgatgggagctgctggcggg
ttgacaaatttggccaaactgccagccagtaatgtgttgcttattggtaagcagaaaaag
actatgattgggatggcacaaacttcaatgctgccccatgcgggttacatttattattcg
gatatcgtacaggaggctccagttgatcttcgagcaaaagttgccaggatagtggccgcc
aaaaccaccctcgctgcacgaatagacagcatgcacggcagtccgaatggaactcaaggt
attcgactgagagaggaagtagaaaagaagcttgacaaacttcaggaacctccacctgtc
aaatcggtaaaacctttaccgcctcccatagacgcacccgggaagaagagaggaggacga
cgcgtacgaaagatgaaggagaggatggctgtaacagatctaaggaaagcacagaataga
atgaactttggtgaaattgaagaggatgcatatcaggatgacttgggatatacaagaggg
cagctgggcaaaggtggtgctggccgcattcggaaagtaacagtagatgaaaagacaaga
gttaggttgtcaaaaaccctacagaaagaggttcagcggcagagttccctggggggtcaa
acaacagtgcgaagacaggttgctggtacagcatccagtgttgcttttaccccacttcaa
gggttagaaattgttaatcctcaagcagcagaaaataacagtcaaggacaaggcaataag
tatttctccaatattcttggattcaaaaatgttagcaagtaa
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