Macrobrachium nipponense (oriental river prawn): 135218491
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Entry
135218491 CDS
T09903
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03018
RNA degradation
mnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135218491
09123 Folding, sorting and degradation
03018 RNA degradation
135218491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135218491
03041 Spliceosome [BR:
mnz03041
]
135218491
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135218491
mRNA degradation factors
5'-3' decay
Lsm complex
135218491
Spliceosome [BR:
mnz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135218491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
135218491
NCBI-ProteinID:
XP_064110908
LinkDB
All DBs
Position
9:95427075..95494946
Genome browser
AA seq
96 aa
AA seq
DB search
MANALESYVNHLVSVITGDGRNIVGTLKGFDQTVNLIMDECHERVYSSHRGVEQVILGLY
IVRGDNVALIGEVDEDLDARLDLENIRAEPLNECKT
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgctctggaaagctatgttaatcatcttgtttctgtcataacaggagatgga
agaaatattgtgggaactcttaagggctttgatcagacagtaaaccttattatggatgaa
tgtcatgaaagagtgtatagttctcatcgaggggtggagcaagttattttaggtctctat
attgtcagaggtgataatgtagccctgataggtgaagtagacgaagatttagatgcaaga
ctagatttagagaacattcgagcagagccactaaatgaatgcaaaacgtga
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