Macrobrachium nipponense (oriental river prawn): 135219333
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Entry
135219333 CDS
T09903
Name
(RefSeq) zinc finger protein ubi-d4 A-like isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135219333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnz03041
]
135219333
03036 Chromosome and associated proteins [BR:
mnz03036
]
135219333
Spliceosome [BR:
mnz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135219333
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135219333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
zf_RING_Vps8
zf-C2H2_4
PHD_2
TNP-like_RNaseH_C
PHD_4
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
135219333
NCBI-ProteinID:
XP_064112070
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All DBs
Position
1:complement(59009003..59354540)
Genome browser
AA seq
525 aa
AA seq
DB search
MADTLVQSNLEKISSFLQDVQYRSLMINSANYNVRLMRERKTRLPFLDSQTGIAQNPCKL
YMSARHRMPGTVEGQLYVYPSQRWCRRKRSYMAISHEHWLLKKTIKEPEGDEHTIVTVEN
PAAVSTEDTNMIYENKSFQETFYYDETAFYEDEEEEPDDDDDDTYSARTTTARKRKKPAK
VPKPPKQSSGRGRKKREGAIKPMVEVDEETPGKPYECQLCGARYKTRQGLSYHLSHTHKG
GRTNSGGSRTRGASNNSAGTRGETPAAPAGSYQPQAYQPDALAGLTEFQDSYLGYLSAGQ
DASPTGRSGSSSTSNSSRRSSGGGGVSGGNVTISTGNGSSSSNSRGSKGNSGTWSGLTSV
GSPSAMMPGTGNSTGTLEYTRDSSPGRLSVQETEQQQYVKSPKPAVEKGKAQPSPYCDFC
LGDTLMNKKTGESEELVSCADCGRSGHPTCLQFTAHMMISVRQYRWQCIECKCCTLCGTS
ENDDQLLFCDDCDRGYHLYCLRPPLQEPPEGEWSCDLCLQQFHTK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccgacactttggtgcagtccaacttggagaaaataagcagttttctccaggacgtg
cagtaccgctcattgatgataaacagtgccaactacaatgtacgactcatgcgagagcgg
aagacccgtctacccttcctcgattctcaaacaggaattgctcagaacccatgcaagcta
tacatgagcgctcggcatcgtatgcctgggacggtagaaggtcagctctatgtttaccca
tctcaaagatggtgcagaagaaaacgttcatatatggcaatttcacacgagcattggctc
ctgaaaaagactataaaagagccggaaggagatgagcatacaattgtaacagttgagaat
cctgcagctgtcagtacagaggacaccaacatgatttatgaaaataagtctttccaggaa
accttttattatgatgaaactgctttctatgaagatgaggaagaggaacctgatgatgat
gatgatgatacctactctgcacgtactacaacagcgcgtaaaaggaaaaagccagcgaaa
gttccaaagcctcccaagcagtccagtggcagaggaagaaagaagcgggaaggtgccata
aaacccatggttgaggttgatgaagagactcctggaaaaccatatgaatgccaactgtgt
ggtgcccgctacaagaccagacagggtctctcctaccatctctcgcacacacacaaaggg
ggcaggactaactccgggggcagtcgaaccagaggggccagcaacaattctgctggtact
agaggcgaaaccccagctgcacctgctgggagctaccaaccccaagcctaccaacctgat
gctctagcaggcctgacagagtttcaggacagttacctaggttacttatctgcgggtcag
gatgcctcgcccacggggcgtagtggcagtagcagtacaagcaacagtagtagacgatct
agtggtgggggaggggtatctgggggaaatgtaactatatcaactgggaatggcagcagt
tcttccaacagccgtggatccaagggaaatagtgggacttggtcagggttgacaagtgtt
gggtcaccgtctgccatgatgcctggaactggaaatagcactggcactcttgaatacacg
agggactccagtccaggaagattaagtgttcaggagactgaacagcaacagtatgttaaa
tcgccaaaaccagctgtggaaaagggaaaagcacagccaagtccatactgtgatttctgc
ctgggtgatactcttatgaataaaaagacaggggaatctgaagaattggtctcttgcgct
gactgtggaagatctggtcatcccacttgtctgcagtttacggcccatatgatgatctca
gtgagacagtatcgatggcagtgtattgaatgtaaatgctgcacactctgcggaacttct
gaaaatgatgatcaactgcttttctgtgacgattgtgaccgtggctatcatctatactgc
ctacggccccctttgcaggagccaccagagggtgaatggtcatgtgatctctgccttcaa
caatttcatacaaagtga
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