Macrobrachium nipponense (oriental river prawn): 135219590
Help
Entry
135219590 CDS
T09903
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase-like
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mnz03016
]
135219590
Enzymes [BR:
mnz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
135219590
Transfer RNA biogenesis [BR:
mnz03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
135219590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Baculo_11_kDa
Motif
Other DBs
NCBI-GeneID:
135219590
NCBI-ProteinID:
XP_064112548
LinkDB
All DBs
Position
1:complement(120975034..121118306)
Genome browser
AA seq
557 aa
AA seq
DB search
MEDIEDLFQDDGEVLAPRYRNSVIPRVRHRKKATHQENGECEVTNYCDSIIPGTQKIFVK
TWGCAHNSSDSEYMAGQLAAYGYKITEEKMEADLWLLNSCTVKNPAEDHFRNEIKTGRDA
GKKVVVAGCVPQGAPRSEFLQGLSVVGVQQIDRVVEVVEETLKGNSVRLLGQKKQGGKKQ
GGASLLLPKVRRNPLIEIISINTGCLNQCTYCKTKHARGELGSYPIEEIVARAQQSFNEG
VCEVWLTSEDTGAYGRDIGVTLPELLWKLVDVIPEGCRLRLGMTNPPYILDHLEEMAKIM
QHPRVYAFLHVPVQSGSDGVLGDMRREYTVKDFRLVVDFLRERVPGITIATDIICGFPTE
TEEDFKQTIDLCSMYKFPSLFINQFYPRPGTPAAKMKRIPTKEVKNRSRQLTDVFQSYRP
YDHKLGEKQVVLVTEEAHDKEHLVGHNKYYEQVLVPKCDEYLGKMVEVEIIETGKHYMRG
RPIDTSKLISPSLQEPLPKGTVSGLSHLVCTEEEAKKHKLKEELVKQERYIILSFILLIS
ALLVKLVWVCFKMMKSI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatagaggatttgtttcaagatgatggagaagtgttggcaccaaggtatcgt
aactccgtaatcccaagagtaagacatcgcaagaaagcaacacatcaagagaatggagag
tgtgaagttacaaattactgtgacagcatcattcctggaacacagaagatatttgtgaaa
acgtggggttgcgctcataatagctctgacagtgaatatatggcaggacagttagcagca
tatggatacaaaattacagaggaaaaaatggaggctgatctttggctcctcaatagttgt
acagtgaaaaacccagcagaagaccattttagaaatgagatcaaaactggaagagatgct
ggtaaaaaagttgtagtagcaggttgtgtaccacaaggtgctcctcgttcagaatttctc
cagggcttaagtgttgttggagtacaacaaatagatcgcgttgttgaagtagtggaagaa
actctgaaaggtaattctgtaaggcttcttggacagaagaaacagggtggaaagaagcaa
ggtggggcatctcttcttttacccaaagttagacgaaatcctctgattgaaattatatca
ataaacacaggttgtttgaaccaatgtacttactgcaagaccaagcatgcaagaggagaa
cttggatcctatccaattgaggaaatagttgctagagcgcaacagtctttcaacgaaggt
gtttgtgaagtttggctcacttctgaagacactggtgcatatgggagagacataggtgtc
acgctgcctgaattgttatggaaattagttgatgttataccagagggttgtcggttacga
ttgggcatgacaaatcctccctatatattagaccatttggaggagatggccaagattatg
caacatcccagagtttatgcatttttacatgttcctgtccagtcagggagtgatggtgtc
cttggagatatgagaagagaatacacggttaaagattttcgccttgtagttgattttttg
cgtgaaagagttcccggaattactatcgctacagacataatttgtggctttcccacagaa
actgaggaagacttcaaacagaccattgacctatgtagcatgtataaatttccatctctt
ttcataaatcagttctatccacgtcctggaacaccagcagcaaaaatgaagagaataccc
accaaagaggtaaaaaaccgatcaagacagcttactgacgtttttcagtcataccggcca
tatgatcacaagctaggagagaagcaagttgtgcttgtaactgaagaggctcatgacaaa
gaacacttggttgggcacaataaatactatgaacaagtattggtaccaaaatgtgatgaa
tatttaggtaagatggttgaagtcgagattattgaaactggtaaacattacatgcgtggt
cgtcctattgatacatcaaagctcatatctccttctttacaagagcctttaccaaaggga
acagtgtccggcttatcacatttagtatgtactgaagaagaagcaaagaaacataaatta
aaagaagaattagttaaacaggaacgatacattattctgagttttatactgttaatttca
gctttgttggttaagctagtttgggtatgcttcaaaatgatgaagagtatttga
DBGET
integrated database retrieval system
