Macrobrachium nipponense (oriental river prawn): 135219914
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Entry
135219914 CDS
T09903
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135219914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135219914
03012 Translation factors [BR:
mnz03012
]
135219914
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
135219914
Translation factors [BR:
mnz03012
]
Eukaryotic type
Release factors
135219914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
G-alpha
Motif
Other DBs
NCBI-GeneID:
135219914
NCBI-ProteinID:
XP_064113199
LinkDB
All DBs
Position
1:complement(184535541..184604980)
Genome browser
AA seq
569 aa
AA seq
DB search
MSENNVAPDSWETAADEPTETLSSSFTTLNVNAPVFIPNVNAPVFVPSYMVETATQSRPT
APEPPPEPAAGGTLDENMVNNDDVPADSWEEAADAATPSPSQETPPSPPTPATPDDDEDE
DADSEGTRKIKKKPIEEDESSKKEPVNVIFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKY
EREAKEKNRETWYLSWALDTNLEERDKGKTVEVGRAYFETEQKHFTILDAPGHKSFVPNM
IGGACQADLAVLVISARKGEFETGFERGGQTREHAMLAKTAGVKHLIVLINKMDDSTVQW
SEIRYNECKDKLVPYLKKVGFNPSKDIMFMPCSGLTGANLREPIEDSLCPWFKGPAFIPY
INQLPPLNRNITGPFMMPVVDRYNDRGTIVIGKVESGGCKKGDSILVMPNKTPVTVDTLW
RNDDEANAVRCGENVKVKLRGVEEADVAPGFVICDPNNPCKTGRIFDAQVVILEHKSIIC
AGYSAVCHMHTVAEEVTVKLLICTVDKKTGEKSKVRPRFVKQDQIAIMRFETSGVICMEA
FKDHPQLGRFTLRDEGKTIAIGKVLKVVE
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagaataacgtggcaccggattcgtgggagacggcggccgatgagccaacggaa
acgctttcaagtagcttcacaaccctcaacgtcaacgccccggtcttcatccccaacgtg
aatgcgccagtgttcgttcccagctatatggtggaaactgctactcaaagtcgaccaacg
gcgccagagccgccgcctgaacccgcagcaggagggacacttgacgaaaatatggtgaac
aatgatgatgtcccagctgattcttgggaagaggctgctgatgcagccacaccttcgcct
tctcaagagacccctccaagtccgccaacccctgctactccagacgatgatgaggatgag
gatgctgatagtgagggcaccagaaaaattaaaaagaagcccattgaggaggacgaaagt
tcaaaaaaggagcctgtgaatgtcatttttattgggcatgttgatgctggaaagtctaca
attggtggtcaaattatgtacctaactggaatggtggacaaacgtactctagaaaaatat
gagagggaggccaaagaaaagaacagagaaacatggtatctatcttgggcattagatacc
aatttggaagaacgcgataagggcaaaacagttgaggttggcagagcatattttgagact
gaacaaaaacacttcaccattttagatgcgccaggtcacaagagttttgttccaaatatg
attggtggtgcttgccaagcagacttggctgttttggtaatatctgcaagaaaaggtgaa
tttgaaactggatttgagagaggtggccagaccagagaacacgctatgttagcaaagact
gcaggagtcaaacacctcattgttttgataaataaaatggatgactcaacagtgcaatgg
tcggaaattagatataatgaatgtaaggataaattggtaccctatttaaagaaggttggc
ttcaatcccagtaaagatataatgtttatgccctgctcaggcctaacaggcgcaaaccta
agagagcccatagaagactcattatgtccatggtttaagggtcctgcttttattccatat
atcaatcagttaccacccttaaatagaaatattactggacctttcatgatgccagttgtt
gatcgctacaatgacagaggaaccattgtaataggcaaggtggaaagtggaggttgtaaa
aagggggacagcatcttggtaatgcctaataagactcctgtaacagttgatacattgtgg
agaaatgatgatgaagcaaatgctgttagatgtggtgaaaatgttaaggttaagctccgt
ggtgtagaagaagcagatgttgcacccggatttgttatctgtgatccaaacaacccctgt
aaaactggaaggatatttgatgctcaggttgttatattagaacacaagtccattatttgt
gcgggttattcagcagtttgtcacatgcatactgttgcagaagaagttacggtgaagcta
cttatttgtactgtagataagaagactggtgaaaaatcgaaggttaggccgcgatttgtc
aaacaagatcagattgcaatcatgagatttgaaacatcaggagtaatttgtatggaagct
ttcaaagatcatccacagcttggacgatttactttaagagatgaaggaaagaccattgcc
attggaaaagttttaaaggtggtggagtaa
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