Macrobrachium nipponense (oriental river prawn): 135219993
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Entry
135219993 CDS
T09903
Name
(RefSeq) sonic hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mnz01002
]
135219993
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mnz00536
]
135219993
Peptidases and inhibitors [BR:
mnz01002
]
Cysteine peptidases
Family C46: hedgehog family
135219993
Glycosaminoglycan binding proteins [BR:
mnz00536
]
Heparan sulfate / Heparin
Morphogens
135219993
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Hint_2
Motif
Other DBs
NCBI-GeneID:
135219993
NCBI-ProteinID:
XP_064113346
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Position
1:complement(196971008..197174987)
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AA seq
474 aa
AA seq
DB search
MGQGARSGGSSWWGQRTPRNWRLQVYTCFLVVSVLCQSCVQCCGPGRGGGRRRSPRKLTP
LVFKQHVPNVSENTLGASGLTEGPITRSDPRFHDLVPNYNSDIIFRDEEGTGADRLMTER
CKEKLNTLAISVMNQWPGVRVRVIEGWEEEFDHAPHSLHYEGRAVDITTSDKDRAKYGML
ARLAREAGFDWVYYESRSHIHCSVKSESSAASKLGGCFPGSGSVMTPSGPRPVSTLQEGD
EVQVMRTDGTLAFSPVLMFLHRDEQASRLFLQLRTSKGKILTLTSSHLVFILPREDATSK
TPSLADALTSGGAALAARVEEGDFLLVRQDGGGVALEEVTEVTEVKGSGVFAPLTSEGTV
VVDGVVASCYAVIDSQRIAHWAFFPVRFYNNLKETILSILRKVGAITTPIQRKTEDVAYS
SNIQNLTQNEVLWKGGGSFENNEVGLETNVHIHWYARFLYTIASRLLPAHLVYS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagggagcgcgctcgggcggctcttcctggtgggggcaaaggaccccgcgaaat
tggaggctacaggtgtacacgtgttttctcgtggtgagcgtcctgtgtcaatcatgcgtt
cagtgctgtgggccaggtcgagggggcggacgaaggaggtctcctcgcaagctgaccccg
ctagtgttcaagcagcatgtgcccaacgtgtctgagaataccctgggggcatcggggctc
accgaaggacccataacgaggagtgatcccaggttccacgatttagtgccaaactacaat
tccgacatcattttcagggacgaggaaggaacaggcgccgatcgtctcatgacggagaga
tgcaaggagaagctgaatacgctggcaattagcgtcatgaaccagtggcctggggtcaga
gtcagggtcatcgaagggtgggaggaggaatttgaccacgcgccacacagcctccactat
gaaggaagagccgttgacatcacaacttccgacaaggaccgggcgaaatacgggatgctg
gctagacttgcgagagaggccggcttcgactgggtctactacgagtcgagatctcacatc
cactgttccgtcaagtctgaatcctcagcggcgagtaagctaggaggctgttttccgggg
agcggcagcgtcatgacaccatcgggaccgagacctgtgtcgacgctgcaagagggtgac
gaagtgcaggttatgaggaccgacggaacactggcgttcagtccggtgcttatgttccta
cacagagacgaacaggcctctcgactattcctccagctgagaacttccaaaggaaagatc
ctcactctcacgtcctctcacctcgtcttcatcctgcccagagaagacgcgacgagcaag
accccgagtctcgcggatgccctgacgtctggtggggcagcacttgcagcgagggtcgaa
gagggagacttcctcctggtgagacaggacggtggcggcgtggcactggaggaggtcacg
gaagtcaccgaggtcaagggatcgggggttttcgcccccctgacatccgaggggacagtt
gtggtggacggagtggttgcctcctgctatgctgtcatcgattcgcagagaatagctcac
tgggccttctttcccgtcagattttacaataacctgaaggaaacgatcctttctatacta
aggaaagttggtgctattacaacgcccatccaaagaaaaacagaggacgtggcctacagt
agcaacatccaaaatctcacgcagaacgaggtcctgtggaaaggcggcggctcctttgag
aacaatgaagtgggccttgaaacgaatgtccacattcattggtacgctcgctttttgtac
actatagcatctaggcttcttccagcccatctagtgtactcgtag
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