Macrobrachium nipponense (oriental river prawn): 135220066
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Entry
135220066 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135220066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135220066
04121 Ubiquitin system [BR:
mnz04121
]
135220066
03036 Chromosome and associated proteins [BR:
mnz03036
]
135220066
03400 DNA repair and recombination proteins [BR:
mnz03400
]
135220066
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
135220066
Ubiquitin system [BR:
mnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
135220066
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
135220066
DNA repair and recombination proteins [BR:
mnz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
135220066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
BRCT
zf-RING_6
Ank_KRIT1
BRCT_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_2
zf-C3HC4
Prok-RING_4
zf-RING_2
RTT107_BRCT_5
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
135220066
NCBI-ProteinID:
XP_064113489
LinkDB
All DBs
Position
11:complement(9730628..9771739)
Genome browser
AA seq
591 aa
AA seq
DB search
MDVLKLFEWEKTIKAIKHLESLLLCSVCKEIAEDAKCLGRCEHFLCAKCVDTIQNGTCPK
CKIPAPPCEMQPDRIISELVTSVKDLRHLLDGGEIMRVEQGIEAPLLPMLPCTPKNQISK
PRPSIVTKAKKNQLVSKSIEKDDKATLTKTSTAKSKKDTNNSKVKPKTKTPSRTTKDKSL
NKSTVPITATKIDMQAVTPEGKKFLKVTNLSALGMSPSAPSINKRNSKGETMLHIACIKG
DADKVKALLEDGANPNSKDNAGWTPLHEACSHGFHNIAEMLLQHGAIVDVPGGGSDENPL
HDAVTQGHIELIKLLRSWGASDTARDRQGHTPRSLASLCMGSEEIIAALDTPMNSMIKKP
PVMPPFLEKMVLLGSGLSTSQSKNLEQFSRMLKARLVSEFSSEVSHIIVNCTSDRVVFHK
TPEYLMGIASGKWIVSQNWMDECLAQGMALNPESYQVQGSNEGLNRDAPKRARMNAAKMR
PGLFSGIHIFLWGNFKESFRNKKVLECLVKAGNGIVLGREPNPESTAGMRTVPYHTQPND
TLGSCSHIILYQEGSVEPQIKYNMEHIKTLPVSWFVNCIEAFTILTPPKHP
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggatgttttgaaattatttgagtgggagaaaaccataaaggctatcaaacatctagag
agtcttttgctgtgtagtgtatgcaaggaaatagctgaggatgcaaaatgtcttgggcgc
tgtgaacattttttatgtgccaagtgtgtggatactatacaaaatgggacttgtccaaaa
tgtaaaattcctgctccaccttgtgaaatgcaaccagatcgcatcatttctgaacttgtt
acatcagtgaaagatttacgacaccttcttgatggtggggagataatgagagttgagcaa
ggaattgaagctccattattaccaatgttaccatgcacacctaagaaccaaatatccaaa
cctcgtccaagcatagttacaaaagctaaaaaaaaccagctagtcagtaaaagtattgaa
aaagatgataaagcaacacttacaaagacaagtacagcaaagtctaaaaaagatacaaat
aacagtaaagttaaaccaaaaacaaagacacctagtagaactacaaaggataaaagttta
aataaatcaacagtacccattactgctacaaagattgatatgcaggcagttacaccagaa
gggaagaagtttttaaaagttactaacttgagtgcccttggcatgagcccaagtgctcca
tctatcaataagcggaattctaaaggagagaccatgcttcatattgcttgtattaaggga
gatgctgacaaagtaaaagcacttttagaagatggagctaatcccaattcaaaagacaat
gcaggatggactcctttgcatgaagcatgtagccatgggtttcacaacattgctgaaatg
cttttacaacatggtgccattgttgatgtacctggtgggggaagtgatgaaaatccactt
catgacgctgttacacaaggtcatatagaactgatcaaactccttaggtcatggggagca
agtgatacagcaagagatcggcaagggcatacccctaggtcactagcatcgttatgcatg
ggaagtgaagaaataattgctgctctagatactcccatgaacagtatgattaaaaaacca
cctgtgatgccccctttcttggagaagatggttctcttaggttctggattaagtacatcc
cagtccaagaatttagagcagttttccaggatgctgaaggcccgcttagtttcagagttc
agttcagaggtgtcacacatcatcgttaactgcacatctgatagagttgtttttcataag
acaccggagtacttgatggggattgcttctggcaagtggatagtctcacagaattggatg
gatgaatgtcttgctcaaggaatggctttgaatccagagtcttatcaagttcaaggaagt
aacgaaggtttgaatagagatgctcctaaacgtgcaaggatgaatgcagccaaaatgcgt
ccaggattgttcagcggcatccacatatttttatggggaaacttcaaggagtcatttcgt
aacaaaaaagtacttgagtgtttggtcaaagcaggaaatggaatagttctaggccgagag
cctaacccagaatctacagcaggcatgagaacagtgccttatcatacacaacctaatgat
actttaggtagttgctctcacattatattatatcaagaaggttcagttgaacctcaaatt
aagtataatatggaacatatcaaaacccttccagtctcatggtttgttaactgtattgag
gcttttactattttaacaccacctaaacatccttag
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