Macrobrachium nipponense (oriental river prawn): 135220116
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Entry
135220116 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135220116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135220116
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135220116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
135220116
NCBI-ProteinID:
XP_064113498
LinkDB
All DBs
Position
1:complement(197488873..197492589)
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AA seq
194 aa
AA seq
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MAAGRDSRRIQGPEKSISYTVFQPKEKKPFLGDDGMRKDGRSAIDPRKLFMSVGIISQAK
GSSYLEIGNTKXCCGVYGPKDIQRGKRLQMTGQVMCEVKMAPFSNIIRKSPQPDKRQREM
SRQMKEALESVIVLEKFPKSQIDVYLTVIEDDGGALSACITAAGLALCHANIDVYDFLIG
STVTQICGRSLHIT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggacgtgattcccgtcgtattcaaggtccagagaagtccatctcttacaca
gtatttcaaccaaaagaaaagaagcctttcttgggagatgatggaatgcgtaaggatgga
cgatcggccattgatccacgaaaactttttatgagtgtgggtattataagtcaagccaaa
ggttcatcatatttggaaattggaaatactaaanngtgttgtggtgtatacggcccaaaa
gacatccagagaggtaaacgacttcaaatgactggacaggtaatgtgtgaagttaagatg
gctccattttccaacataattaggaagtctccacaaccagacaaaaggcaaagagaaatg
agtagacaaatgaaggaagctttagagtctgttattgtattggaaaaattcccaaagtca
caaattgatgtttatttaacagtcatagaagatgatggaggagcattatcagcatgtatt
actgcagcaggattagccctttgccatgccaacatagacgtatatgattttttaataggc
tccactgtgacacagatatgtggtagatcccttcatataacctag
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