Macrobrachium nipponense (oriental river prawn): 135220486
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Entry
135220486 CDS
T09903
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135220486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnz03041
]
135220486
Spliceosome [BR:
mnz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
135220486
Complex C
U5 SnRNP specific factors
135220486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
135220486
NCBI-ProteinID:
XP_064113689
LinkDB
All DBs
Position
2:23609495..23660949
Genome browser
AA seq
2374 aa
AA seq
DB search
MALPPYLIPGSPWAYMAQQQAQLAAAQAQAAHAQMHAHFQAQAQAQAQAQSIPRSQAGPP
PVENVSLEKMQEKARRWQQLHNKKYAEKRKFGFVDVQKEEMPPEHIRKIIRDHGDMSSRK
YRHDKRVYLGALKFMPHAVLKLLENMPMPWEQIRDVQVLYHITGAITFVNEIPWVIEPVY
ISQWSTMWMMMRREKRDRRHFKRMRFPPFDDEEPPLDFADNVLDVEPLEAIQMDLDPEED
VEVVDWFYEHKPLIDTKYVNGPTYRKWRLTLPQMATLYRLANQLLTDVSDNNYFYLFDLK
SFFTAKALNMALPGGPKFEPLIKDMNPADEDWNEFNDINKIIVRHQVRTEYRIAFPYLYN
NMPQYVHLSWYHTPVVLYIKTEDPDLPAFYFDPLINPISHRNTVKSETLLPDDDEDFELP
DDVEPLLKEWQLYDDATANGIALLWSPRPFNMRSGTMRRAIDVPLVKTWYREHCPPGQPV
KVRVSYQKLLKYFVLNALKHRPPKAQKKRFLFHSFKATKFFQTTTLDWVEVGLQVCRQGY
NMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDAH
VQYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHVIYYRFNTGQV
GKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHF
DLELRASVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILR
YVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNMGRLTRLYLKSEQERQHNYQKDGPYI
SPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQR
EELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAY
LDQYLWYEADKRRLFPPWVKPGDSEPPPLLVYKWCQGINNLTDVWDTADGECNVMLESKY
EKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVDINYKDMNHTNRYGIIRGLQFASFIV
QYYGLVMDLLVLGLKRSADMAGPPQMPNDFLNFQNVATETQHPIRLYSRYIDRIHIFFRF
TAEEAKDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRL
PRSVTTINWENSFASVYSKDNPNLLFNMAGFECRILPKCRMTHEEFKHRDGVWNLQNEVT
KERTSQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYYRESVVNT
QELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLR
WSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWETEFLDSQRVWAEYALKRQEATAQNR
RLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQFQVLKQNPFWWTHQRHD
GKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNA
QRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHL
WQKIHESVVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNYSK
PSLLADSKDTMDGSTTQKYWIDVQLRWGDYDSHDVERYARAKFLDYTTDNMSLYPSPTGV
LIAIDLAYNLHSAYGNWFPGAKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEP
YLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKI
IHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPN
IVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKNISSYTAFSRLILILR
ALHVNNDRTKVLLKPDKTTITEPHHIWPSLSDEDWIKVEVQLKDLILADYGKKNNVNVAS
LTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSN
YETATFSSKTEWRVRAISATNLHLRTNYIYVSSDDIKETGFTYILPKNVLKKFIIISDLR
TQISGYLYGISPSDNPQVKEIRCIVMPPQWGTHQMVHLPHKLPSHEFLNELEPLGWIHTQ
PNELPQLSPHDITTHATIMADNSSWTTDRTIVITCSFTPGSCSLQAYKLTPSGFEWGRNN
KDMGNNPKGYLPSHYEKVQMLLSDRFLGLFMTPLQGSWNYNFMGVRHDPNMKYDLQLASP
KEFYHEVHRPAHFLNFSSLDEADTAGADRDNALE
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atggcactgccgccatatttgataccaggaagcccctgggcctatatggcccagcagcag
gctcagcttgctgctgcccaggcccaggctgctcatgcccagatgcatgctcattttcaa
gcgcaggcgcaagcacaggctcaagctcagtcgatcccacgctcgcaagctggcccacct
ccggttgaaaatgtctctctggagaaaatgcaagagaaggcacgcaggtggcagcaactt
cacaacaagaaatatgcggagaaaaggaagtttgggtttgttgacgtacagaaagaagag
atgccacctgaacacatccgtaaaatcattagagatcatggagatatgtccagtagaaag
tatcgtcacgacaaacgtgtataccttggtgcactgaaattcatgccccatgctgttctt
aaacttttggagaacatgcctatgccttgggagcagatcagggatgtccaggtcctgtat
cacatcactggagctatcacatttgtaaatgaaattccgtgggttattgagccagtttat
atatctcagtggtccacaatgtggatgatgatgaggagagagaagagagacagacgtcac
ttcaagcgaatgaggttcccgccttttgatgatgaggaacccccattagattttgctgac
aacgttttagatgttgaacctttggaagctatacagatggatttagatccagaggaagat
gttgaggttgtcgattggttctatgagcacaaaccacttattgacacgaagtatgttaac
ggcccaacgtataggaagtggcggctcacccttccacagatggctacattgtatcgtctg
gcaaaccagcttctgacagatgtgtctgataacaactacttctacttgtttgatctgaaa
tctttctttacagcaaaggcattgaacatggcactaccaggtggtcctaaatttgagcct
ctgatcaaggacatgaacccagctgatgaagactggaatgagttcaatgacattaacaag
attatagttcgacatcaagtcaggacagagtaccgcattgctttcccttacttatacaat
aacatgcctcagtatgtccaccttagctggtatcacactcctgtcgttctgtacatcaag
actgaggatcccgatcttccggctttctattttgatcccttgatcaatcccatctctcat
cgaaatactgtcaagagtgagactcttctgcctgatgatgatgaggactttgaattgcca
gatgatgttgagccattattaaaggagtggcaattatatgatgatgcgacagcaaacgga
atagcacttttatggagcccaaggccattcaacatgcgttcaggaacaatgaggagggct
attgacgttccgctcgtgaagacttggtatcgtgagcattgcccacctggacagccagtg
aaggtaagggtgtcataccagaagctgttgaaatactttgtcctcaatgccctaaagcac
cgtccacctaaagcacagaagaaacgcttcctgttccactcgttcaaagccaccaagttc
ttccagacaaccaccttagattgggttgaagtaggtctgcaagtatgtcgacagggttac
aacatgttgaacctcctaattcatcgcaaaaacttgaactatctccatttggattataac
ttcaatcttaagccagtgaaaactttgacaacaaaggagcgtaaaaagtcgagattcggc
aatgcattccatctgtgccgagaaattttgaggctaacaaagctagttgttgatgctcat
gtacagtatcgactgaacaacgttgatgctttccaattagctgatggtttgcagtacata
tttgctcatgttggtcagcttactggtatgtataggtacaagtacaagcttatgagacag
attcgtatgtgtaaggatctcaagcatgttatctactacagattcaatactggacaggta
ggcaagggcccaggatgtggattttgggcaccaggctggcgagtttggcttttcttcatg
agaggcataaccccgctgctagaacgatggcttggtaatcttctgtctcgtcagtttgaa
ggtcgacacagcaaaggcgttgcaaagactgtcaccaagcaaagggtagaatctcacttt
gatctggaactaagagcttctgtcatgcatgacattctggatatgatgcctgaaggcatt
aagcagaataaagcccgcaccatccttcagcacttatcagaggcttggagatgctggaaa
gctaacattccatggaaggttcctggtttgccaactcccattgagaacatgattctgcgt
tatgtgaagatgaaagctgattggtggacaaacactgctcactacaatcgggaacgtata
cgtcgtggtgcaacagtagacaagactgtttgcaagaagaacatgggccgcctcactcgt
ttgtatttgaagagtgagcaggaaaggcaacataactaccagaaggatggtccatacatc
agtcccgaagaggctgttgccatttacaccacaacagttcattggctggagtctcgtcgt
tttgctcccatacctttcccaccactgtcatataagcatgatacaaagctactgatattg
gctctcgagagattgaaggaagcctacagtgtgaagtcccgtttaaatcaatctcaacgt
gaggagctgggacttattgagcaggcatatgataaccctcacgaggctctctcccgtatc
aaacgtcacttgctcacacaaagagctttcaaagaagttggaattgaattcatggatctg
tatagtcatttgattcctgtgtatgatgtggagcctctggagaagataacagatgcttac
cttgatcagtacttgtggtatgaagctgacaaacgtcgcctgtttccaccgtgggtgaaa
cctggagactccgaaccaccacctctcctcgtgtacaaatggtgtcagggtattaacaat
ttgacagatgtatgggatactgctgatggtgaatgcaacgtaatgctggagtccaagtat
gaaaagctctatgagaagatagatttgaccctattgaacagattgctgcgacttattgta
gatcacaatattgctgattacatgactgcgaagaacaatgttgacatcaactacaaggac
atgaaccacacaaatcgttatggcattattagaggcctacagtttgcatcctttattgta
cagtattatggacttgtcatggacttgctagtgctgggtctaaagcgttcagcagatatg
gccggacctcctcagatgcccaatgatttcttaaacttccaaaatgtggccacagaaaca
cagcatccaatccgtctctattcgaggtatattgatagaattcatattttcttcagattt
actgcagaagaagccaaggacctcattcagaggtacctcacagagcacccagatcctaat
aatgaaaacattgtggggtacaacaacaaaaagtgttggcctagagatgcaagaatgagg
cttatgaagcatgatgtcaatttgggacgcgctgttttctgggatataaaaaatcgcttg
cctcgctcggtgaccaccatcaattgggagaattcatttgcttcagtatattctaaagat
aatccaaacttgctcttcaacatggccgggtttgagtgccgtatcttgccaaagtgtcgt
atgacacacgaagaattcaagcacagagatggtgtatggaatctccagaacgaagtcaca
aaggaacgaacgtctcagtgcttcttgagagtagatgatgagtccatgcaaaggttccac
aaccgcgtaagacaaattctcatggcatctggctctaccacattcacaaaaattgtcaat
aaatggaatactgccttgattggattaatgacttactatagagagtctgtcgtaaacacc
caagaacttctggacctgttagtgaaatgtgaaaataagatccaaactcgaatcaaaatt
ggcttgaactctaaaatgccttcaagatttccccctgttgtattctacacacctaaagaa
cttggtggtcttggtatgctttccatgggtcatgtacttattccgcagtcagatttacga
tggagtaagcagactgatgttggcattacgcatttccgctctggtatgagtcacgatgaa
gatcagttgattcctaacttgtacagatacattcagccttgggaaacagagtttttggat
tcacaaagagtttgggccgaatatgccttgaaaagacaagaagcaacagcgcagaaccgt
agattgactctcgaagatctcgaggattcgtgggatcgaggtattccaagaataaacaca
ctcttccagaaggatcgccacacacttgcgtatgataaaggttggagaatacgtacagaa
ttcaagcagttccaggtacttaagcagaatccattttggtggacacaccagagacatgac
ggtaaattgtggaacttgaataactaccgaacagatatgattcaagctttaggtggtgtg
gaaggaattttggagcacacacttttcaaaggaacgtatttccctacatgggagggtctg
ttttgggagaaagcttcaggttttgaagaaagtatgaaatataaaaagttgaccaatgca
cagagatctggtctaaaccagattcccaacagacgtttcactctttggtggtcacctacc
attaatcgagcaaatgtgtatgtaggtttccaggtacaacttgatttgacaggtattttc
atgcatggcaaaattcccaccctcaagatttctcttattcagattttccgagctcacttg
tggcagaagattcacgagtctgttgtgatggacttgtgtcaagtgtttgatcaagagctg
gatgctttggaaattgaaactgtccagaaggaaactattcatcccagaaagtcatacaag
atgaattcttcttgtgctgatattctcctttttgcagcttacaagtggaattattccaaa
ccttcccttttagctgactccaaagacaccatggatggttctacaacacagaaatattgg
attgatgtgcagctgaggtggggtgattatgactcccatgatgtggaacgctatgcaaga
gccaagttcttagattacaccactgataatatgtctctgtatccttctcccactggtgtg
ttaattgctattgacttagcatacaatcttcacagtgcatacggaaactggttccctggt
gcaaagccactgatacaacaagctatggcaaaaatcatgaaagcaaaccctgccttgtac
gtgttacgagagcgtatccgcaaaggtctccaattgtactcttcagagcccactgagccc
tacttgtcttcacaaaactatggtgaacttttctcaaatcaaattatttggtttgtagat
gacactaatgtgtacagggttacaatccataagacatttgaaggaaacttaacaaccaaa
cccatcaatggagctatcttcattttcaatcccagaacaggccagctgtttttgaagatc
attcatacgtctgtatgggcaggtcagaaacgtctcggtcagctagctaagtggaaaact
gcagaagaagttgctgctttaattcgatccttacctgtagaagaacagcccaagcagatt
attgtaactcgaaagggtatgttggatccacttgaggtgcatttgttggatttccctaac
attgtgatcaagggctctgaattgcagttgcctttccaggcttgtttgaaggtagagaag
tttggtgatttgattcttaaagctacagagccacagatggtactgttcaatttatatgat
gactggttgaagaacatttcatcctatactgcattctcaaggctgattttgatactcagg
gctcttcatgtaaataatgacagaacaaaggttcttctgaagcctgacaaaactacaatc
acagaacctcaccacatctggccatctctgtctgatgaagactggataaaagttgaagtg
cagttgaaagatctcattttggcagattatggtaaaaagaacaatgtcaatgttgcatca
ctcactcagtctgaaatcagggatatcattttaggtatggaaattagtgctccttcagca
cagcgacaacagattgccgaaattgagaaacagactaaagagcagtcacagctgacagca
accaccacaagaactgtcaacaaacatggagatgaaatcatcacctctaccacttctaac
tatgaaacggctacgtttagcagcaagacagaatggagagttcgagccatttctgcaacc
aatctccacttgcgtaccaattacatctatgtatcctccgatgacattaaggagacaggt
ttcacttacattctccctaagaatgttctgaagaagtttatcatcatatctgatctcaga
acacaaatttcaggctacctttatggtattagcccatcggataatccacaggtgaaagag
atccgttgtattgttatgccacctcagtggggaacacatcagatggtgcacttacctcac
aaattaccctctcatgaatttttgaatgaattggaacccttgggttggatccatacccag
cctaatgaattgccacagctttcgccacatgacatcacaactcacgccactatcatggct
gataatagttcctggactacggatcgcaccattgttatcacatgttcatttaccccgggt
tcatgttccctacaagcatacaaactcacaccatcgggcttcgagtggggtcgtaacaac
aaagacatgggcaataatcctaaaggttaccttccctctcattatgaaaaagttcaaatg
ctgctgtctgatagattcttgggactgtttatgactccactgcaaggctcctggaattac
aatttcatgggggtgcgtcacgacccaaatatgaagtatgacttgcaattagccagccct
aaggagttctatcacgaggtccatcgacctgctcacttcttgaatttctcctccttagat
gaagcagacactgcaggggcagacagagataatgccctggagtaa
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integrated database retrieval system
