Macrobrachium nipponense (oriental river prawn): 135220510
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Entry
135220510 CDS
T09903
Name
(RefSeq) transcription factor collier-like isoform X1
KO
K09103
early B-cell factor
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnz03000
]
135220510
Transcription factors [BR:
mnz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
135220510
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
135220510
NCBI-ProteinID:
XP_064113727
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Position
2:complement(31344345..31573940)
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AA seq
629 aa
AA seq
DB search
MFGLGEGLPQPRGPVTTLKEEPLSSTRSWMQPTMVENTHTSVGLGRAHFEKQPPSNLRKS
NFFHFVIALYDRAGQPIEIERTAFLGFIEKDQEPEGQKTNNGIHYRLQLLYANGIRQQQD
IYMRLIDSVSKQAIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
FFLKFFLKCNQNCLKNAGNPRDMRRFQVVISQQVDVTGPLLAVSDNMFVHNNSKHGRRAK
RLDPTEGMFGEYFCLYPPLPATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTML
VWSELVTSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLTEPTIDYGFQRL
QKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLALPAPRSPAMNQTSAMTGFNT
YTGQLAVSVQDTANTQWGEDDYNRGQAPGVSLSSPRGGFGSNASTPHTSSTGSASSSSYG
ASLNAAGYSSSPSNLANMTSSPSLFNSTTTGGGGHGATHHYPPPPPHPHHHHHHHHHHGS
WGSGTGSTSSALLSQFTAGMTNKQRSAFAPVIPSLPATPPLTPITPMGASTTSTTASAAA
AASMNANSAAVAAAAAAAAAASPWQQLLS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcctaggcgagggcctgccacagccacggggccccgtcaccaccctgaaggag
gagcccttgtcctccaccaggtcctggatgcagccgaccatggtggaaaacacccacacg
agtgtgggactgggtcgtgcgcacttcgagaagcagcccccaagcaacctgaggaaatcc
aacttcttccacttcgtcatagccctctacgaccgtgctggacagcccatcgaaatcgaa
cgaacagccttcctgggattcattgaaaaagaccaagagccggaaggacagaaaaccaac
aatggcatccattacagactacagctgctgtatgcaaatggcataaggcagcagcaagat
atttatatgagacttattgattcagtctccaaacaggcaatcgtatacgagggtcaagac
aagaacccagagatgtgtcgggttctcctcacacacgaagtgatgtgcagccggtgttgt
gacaagaagagctgcggaaatagaaacgaaacgccttctgatccagtcataatagacaga
ttttttctgaaattcttcctgaagtgtaaccagaactgcttgaagaatgccggtaacccc
agagatatgaggcgttttcaggtggtgatatcacagcaggtggacgtcacagggcccctt
ctggccgtctccgacaacatgttcgtccacaacaattcgaaacacggccgaagagccaaa
cgactcgacccaaccgaaggaatgtttggtgagtacttctgtctatatccgccgctgcca
gcgacaccttgcatcaaagcgatctcaccttcggagggctggacgacaggcggcgccacg
gtcatcatcatcggggacaacttcttcgacggactccaggtcgtattcggcaccatgctc
gtctggagtgagttggtgacctctcacgctatccgggtccagactccgcctcgacacatt
ccgggcgtcgtagaggtcactctgtcttacaagtcaaaacagttttgcaagggcgccccg
ggcagattcgtctatgtgtccttgacagaacccaccatcgactacggtttccagcgcctg
cagaagctcatcccgagacatccaggcgacccggagaaacttccgaaagagatcatcttg
aaaagggcggcggatctagcagaggccctctactccatgcccaggaacaatcagttggcc
ttaccggcgcccaggtcgccagccatgaaccagacgtctgctatgacaggcttcaacacg
tacacgggacaactcgctgtcagtgtacaggacacagctaatacccagtggggagaagac
gactacaaccgcggccaggcccccggcgtgagcttatcgtcaccccggggaggattcggg
tccaatgcctccacgcctcacacctcctccaccgggtcggcgtcgtcctcctcctacggc
gcctctctgaacgctgccggctactcctcctccccttccaaccttgcaaacatgacctcg
tcgccgagcctcttcaacagcaccacaactggtggtggtgggcacggcgctacgcatcac
tacccccctcccccaccacacccccatcatcaccaccaccatcaccatcaccatggaagt
tggggaagcggcactggttcgacctcatccgccctcctgtcacagttcaccgctggaatg
accaacaaacaacgcagtgccttcgcccccgtcattccaagccttccagcgaccccgcct
ctcacgcccatcactcccatgggggcgtcgacgacgagcaccaccgcttccgccgccgcc
gccgcttccatgaacgcaaacagtgctgctgtggcagctgctgcagctgcggcagccgcg
gcgtccccctggcaacagcttctctcctag
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