Macrobrachium nipponense (oriental river prawn): 135220611
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Entry
135220611 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mnz03009
]
135220611
Enzymes [BR:
mnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135220611
Ribosome biogenesis [BR:
mnz03009
]
Eukaryotic type
90S particles
Helicases
135220611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
DEAD
HA2_C
Helicase_C
AAA_19
ResIII
HA2_N
AAA_30
ATPase
Flavi_DEAD
AAA_22
SLFN-g3_helicase
PhoH
nSTAND3
ABC_tran
HTS
Motif
Other DBs
NCBI-GeneID:
135220611
NCBI-ProteinID:
XP_064113986
LinkDB
All DBs
Position
2:complement(58167703..58427001)
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AA seq
1199 aa
AA seq
DB search
MGRARSKYRQKQVVVTDDTEQKKIKVEINKDLYGKYDESNALVLPSKKRATKKLRDKKAA
PEKLLSKRKRKLLEKIVDKKRKKSLRASLLAALEKVQADPKDLEKLTQLQATQTVGRKKF
SSDYYALSKSEVESNQGRILSSIKGKKRKMSECLKDENDADDPNVIRLGDISSEDSDDAD
SSEESDGIIVEKVDTPQVDSNPGSDNISEPSRMNANKENGDNKQIISDGDVSIIDTNCTD
DTIETVEKVIRPATVETVIRPATFVTVNRTDEIQKGRLKLPILSEEQSIMEAINENPVTV
VVGSTGSGKTTQVPQFLYEAGYTSNGQMIGVTEPRRVAAISMSQRVAHEMNLTSQEVSYQ
IRFQGNTTPKTKIKFMTDGVLLKEIQLDPTLKKYSVIIIDEAHERSIFSDILIGILSRII
PIRLKKKRPLKLVIMSATLRIEDFTENVRLFKEPKPPVLKVESRMFEVTIHYNKRTVENY
LEEAYKKVCKIHRQLPDGGILVFLTGQQEVHTLMNRLRRSFPFHSQNSQDVSGMSGYRKR
KLQLKEKRRTGKENETVKKIVLPEVKLEDYTPAFLDDANMETADGHLNDISNTNESDDEF
DEEEPRNVLSAGENEQPLYVLPLYSVLPPDKQHMVFQPPPXGTRLCVIATNVAETSLTIP
NIKYVVDSGKVKEKVYDKVTGVSMFHVTWTSQASANQRAGRAGRTAPGHCYRLYSSAVFD
QDFEKFSKAEIQERPIDDIILIMKSMNLPVINFPFPTPPDYIQIRSGMKRLMILGALRER
EISECKEQRKKLPKREKKDLTVITPLGKAMAAFPLAPRYGKMLALSHQHSLLPYTIVIVA
ALTIPEVLLETPIEPKETNEGCQQRWHNLRLCWAGAGDSRKLGDIMVLLRCVGSAEYQDG
NELWCEKNGVRHKAITEIRKLRRQLTNEINLIIPSCNISLDPKMPPPTDEQIHLLRQIVT
AGLIDHVAYRVNEWDIKDPADKVKWKYAYRTQEMEEPVFLPTSSVVRVDMPQWLVYQDIY
ETNKMFMRNVCIIEPEWLAVFAPHLCSFSAPLESPEPRYDPDQDKVLCYCSAKFGSSGWE
MPDVEVEYPHSQDLFKWVAYYFLTGELCPPLRAFVEHIYEPRVIVNPVAIRFRKQRESLL
QGLMSRNVTNVTKLKQIWSSEPSYLQNEYIQWIEDEDVRIKVKKIWPPLPDDQKDIMVC
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgggacgggccaggagtaaatatagacaaaaacaagtagtcgtaacagatgatactgag
caaaaaaagattaaagttgagatcaacaaagacttatatgggaaatacgatgaaagtaat
gctttggtgcttccatcgaagaagcgtgctacgaagaagcttcgtgacaaaaaggcagct
cccgaaaaacttttgtccaaaagaaagagaaaacttttagaaaaaattgttgataagaag
aggaaaaagtcacttcgtgctagtcttctagctgctttagaaaaagtgcaggcagatcct
aaagatttggagaaattgacccaactccaagcaacccagactgttggcagaaagaagttt
tccagtgattattatgcactttcaaaatctgaagttgagagtaaccaaggaagaatttta
agcagtattaagggaaaaaagcgcaaaatgtcagaatgtctaaaggatgagaacgatgca
gatgatcctaatgtgattcgtcttggggatatatctagtgaagattctgatgatgctgat
agttctgaggaatcagatggtataattgtagaaaaagtggatacacctcaggtagatagt
aatccaggatcagataatatttcagagccctcaagaatgaatgcaaataaagaaaatggt
gataataaacagattatttctgatggagatgttagtattattgatacaaactgtacagat
gatacaattgaaaccgttgaaaaagttattcgtccagctacagtcgaaacagttattcgt
cctgctacatttgtaacagtaaacagaactgatgaaattcaaaaaggaaggctcaagtta
cctatattatcagaagaacagtccattatggaagctatcaatgaaaacccagttactgta
gttgttggaagtacaggaagtggaaagactactcaggtcccacaatttttgtatgaagca
ggatataccagtaatggccaaatgattggagtaacagagccaaggagagtggcagccata
tcaatgtcacaacgagttgcacatgaaatgaatttgacatcacaagaggtttcatatcag
ataagatttcaagggaatactactccaaaaacaaagattaaattcatgacagatggagtg
ttattgaaggaaatacaattggaccctacactgaagaaatattctgtcattattattgat
gaagcccatgaaagaagtatattctctgatatacttataggtatcctctctcgaataatt
ccgatacgacttaaaaagaaaagacccttgaaacttgtgataatgtcagcaacactgaga
attgaagatttcactgaaaatgtaagacttttcaaagaaccaaaacccccagttttaaag
gtggaatcaagaatgtttgaagttacaattcactataataaaagaacagtggaaaactat
cttgaggaagcttacaagaaagtttgtaaaattcatcgacagctgccagatggtggaata
cttgtcttcttaacaggtcagcaagaagtccacactttgatgaataggctgagaagatct
tttccttttcattcacaaaattctcaagatgtaagtggaatgagtggataccgaaaaagg
aagctacagctcaaggagaaaaggcgaacaggaaaagaaaatgagactgttaaaaaaatt
gtattacctgaagttaaattggaagactatacgccagcatttttagatgatgccaacatg
gaaactgctgatggccatcttaatgacatcagtaataccaatgaatctgatgatgaattt
gatgaggaggaacccaggaatgtattaagcgcaggagaaaatgagcagcctttatatgta
ttacccttatattcagtattgccaccagacaagcaacatatggttttccaacctccacca
ngaggtaccagattatgtgtaatagcaactaatgttgctgaaacatctcttactattcct
aatattaaatatgtggtggattcagggaaagtgaaggaaaaggtttatgacaaagtaact
ggggtttccatgtttcatgttacgtggacatcacaagcatcagcaaatcaaagggctggt
cgtgcagggcgtactgctccaggccattgctatcgactctactcttctgcagtctttgac
caagattttgaaaaattttcgaaagcagaaattcaagaacgacccatcgatgacataatt
ctcatcatgaaatctatgaatcttcctgtgatcaattttccttttcccacaccacctgat
tacatccagattcgttctggaatgaaacgtttgatgattcttggtgcactgagggagaga
gagatttctgaatgcaaagagcagagaaagaaactaccaaaaagggaaaagaaagatttg
actgttattacaccattggggaaagccatggcagcatttcctctcgctccacgatatgga
aaaatgctagctcttagtcatcaacactctcttcttccctataccattgttatagtagct
gcccttacaataccagaagtcttactagaaactcccattgaaccaaaagaaactaatgaa
ggttgtcagcaaagatggcataacttgcgactttgttgggcaggagcaggtgattctcga
aagctaggagatattatggttcttttgaggtgtgttggttctgcagagtatcaagatgga
aatgaactgtggtgtgaaaagaatggtgtaaggcacaaggcaataacggagattcgtaaa
ttaagaagacaattaaccaatgaaattaatcttataattcctagctgtaatatcagtctt
gatcccaagatgcccccaccaacagatgaacagatacatctcctacgtcagattgtaact
gcaggattaattgatcatgttgcatatcgagtcaatgaatgggatatcaaagatcctgct
gataaagtaaagtggaaatatgcttatagaacacaagaaatggaagagcctgtgtttctg
cctacttcttctgtagttcgagtagatatgccacagtggttggtttatcaagacatatat
gaaactaataaaatgtttatgagaaatgtatgcataattgaaccagagtggctggctgtt
tttgctcctcatctttgtagtttctctgcacctcttgagtcaccagaacctcggtatgat
ccagaccaagataaagttctttgttactgctcagcaaagtttggttcaagtggatgggaa
atgccagatgtagaggttgaatacccacatagccaagacttatttaagtgggttgcctac
tactttttgactggagaactgtgtccccccttgagagctttcgtggaacacatttatgag
cccagagttattgtgaacccagtagctataaggtttcgaaagcaaagagaaagccttctt
cagggattaatgagtcgtaatgttacaaatgtaaccaaactaaaacagatttggtcatct
gagccttcctatctgcaaaatgaatacatccagtggatagaagatgaagatgtaaggatt
aaagtgaaaaaaatatggccaccacttccagatgaccagaaagatattatggtttgttga
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