Macrobrachium nipponense (oriental river prawn): 135220762
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Entry
135220762 CDS
T09903
Name
(RefSeq) coatomer subunit alpha-like isoform X1
KO
K05236
coatomer subunit alpha
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnz04131
]
135220762
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mnz04147
]
135220762
Membrane trafficking [BR:
mnz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
135220762
Exosome [BR:
mnz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135220762
Exosomal proteins of bladder cancer cells
135220762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_RIG_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
135220762
NCBI-ProteinID:
XP_064114282
LinkDB
All DBs
Position
2:87420213..87472085
Genome browser
AA seq
1226 aa
AA seq
DB search
MLTKFETKSARVKGLSFHSKRPWVLASLHSGIIQLWDYRMCTLVDKFDEHEGPVRAVCFH
QQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTEFHQEYPWILSASDDQTIRIW
NWQSRSCVSILTGHNHYVMCARFHPTQDLIVSASLDSTVRVWDIAGIPGKPGGLRKKNVA
PGMGGLGGGEDHHTRNPELFSAGDATVRHVLEGHDRGVNWAAFHPTLPLVISGSDDRQVK
LWRMNESKAWEVDTCRGHYNNVSCVMFHPRQELILSNSEDKSIRVWDMAKRMCLHTFRRE
HDRFWVLAAHPTLNLFAAGHDSGMIIFKLERERPAYALHGNLLYYVKERFLRRLDLTKNK
DVAVMQLRAGARAPVYSMSFNPAENAVLLTTRTHVLDNSNYDLYQVPKESDSQNPDAPDS
KRSAGLTAVWVARNRFAVMDKSHQIVIKNLQNEVTKKVSTPDCDEIFYAGTGMLLLRDVD
GVSLFDVQQKRVLGTARIAKCRYVVWSANMTTVALLSKHTILICNRKLERLCSITETNRV
KSGSWDDSGVFIYTTSNHIKYALTNGDHGIIRTLELPVYVTRVAGSSVYCLDRQVTPRVL
TIDSTEFRFKLALVQRKYDEVLQMVRGAKLVGQSIIAYLQKKGYPEVALHFVKDERTRFI
LALECGNIDVALEAAKALDDKGCWEKLAEHALLHGNHPVVEYCYQQTKNYDKLSFLYLIT
GNIAKLRRMMKINEIRKDYEGWYTNALYLGDVPERIRVLKACGKTSLALLTASTHGYQQE
TESLAAHVEAGSIPEPLPSAQLLQPPMPVQPMDTAWPLLTVAKGFFDTAVASGKAASGTA
AAMAVDDVGDIAGDGWGDDDEENVEDGELQAEGGDGEGGGWEVDDDLDLPPELEGTSSAA
AGTGEDGYYVPPPRGHPPTHGWTQRSQLAIDHVLAGAFESATRLLHDQVGVVNFEPYRDL
FLSSYAHSRTSYPGAPALPSLSGYPARNWRTAQLKDQLPAVGMRLSNLMDRLKEASQLTT
AAKFSEAVDKLRAILLAVPLIVVDTKQEVTEAQNLLRVCKEYVLGITMELHRKTLGKTSP
DDLKRSLELAAYFTHCELQPGHQILTLRTAVNLAFKMKNYKMAMSFGRRLLNLGPRPEVA
QNIRKVVQACEKNPADELAVQYDEHNPFTMCASSYVPIYRGKPEVQCPLCGASYLPEHKG
ITCTICCVAQVGKDCIGLRISPLQFR
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaaaatttgaaactaaaagtgcaagggttaaaggactgtcttttcattctaaa
cgaccatgggtactagcaagcttgcacagtggtattattcaactatgggattatcgcatg
tgtaccctggtcgataaatttgacgaacatgaagggccagtacgtgcagtatgcttccat
cagcagcagccattatttgtatcagggggtgatgactacaaaatcaaggtttggaattac
aagctcaggagatgcctttttaccctcctcggtcatcttgattacataagaacaactgaa
ttccatcaggaatacccatggatcctgtctgcttcagacgaccagacaatccgcatttgg
aattggcagtctcgttcctgtgtgtctatcttgacaggacacaaccattatgtgatgtgt
gctcgtttccatccaacacaggatcttatagtatctgcttctcttgactccactgttcgc
gtctgggatatcgcaggtattcccggcaagccaggaggtttacgaaagaagaatgtagct
cctggaatgggagggttaggtggtggtgaggatcaccacacccgtaacccagaactgttc
agtgctggagacgctactgttcggcacgtgcttgagggccacgatcgaggagttaattgg
gctgctttccatccgactctgcctcttgtaatatcagggtctgatgaccgtcaggttaaa
ctgtggagaatgaatgaatctaaggcttgggaagtggacacttgccgaggtcattataat
aatgtgtcatgtgtgatgtttcatcctcgacaagaattaattctctcaaactctgaggac
aaatccattcgagtgtgggatatggccaaaaggatgtgcctccatacattccgccgagag
catgacaggttctgggtattagcagcccacccaaccctcaacctgtttgctgctggccat
gacagtggcatgattatattcaagctagagcgtgagaggcctgcatatgccttacatgga
aatcttttatattatgtgaaggaaagattcctacgtcgtctagatctgactaagaacaag
gacgtagcagtgatgcagctgagagcaggtgcacgagctccagtgtacagcatgtccttc
aaccctgcagaaaatgctgtccttctcaccactcgaactcatgtcttggacaacagcaat
tatgatttataccaagtacccaaggaatcagattcacagaatccagatgccccagattcc
aaacgttcagctggccttactgctgtatgggttgcaagaaacagatttgctgtcatggat
aagagtcatcagattgtcatcaagaaccttcagaatgaagttacaaagaaagtttccact
cctgattgtgatgagatattttatgcaggaactggcatgctgctgcttagagatgttgat
ggggtttcattgtttgatgttcagcagaaaagagttctcggtacagcaagaatagcaaaa
tgccgatacgttgtgtggtctgccaacatgaccacagtagccttgctttcaaaacacacc
atccttatctgtaatcggaagctggagaggctttgctcaatcacagagactaatagagtg
aagtcagggtcttgggatgatagtggtgtctttatctacacaacgagcaatcatataaag
tatgctctaaccaatggtgatcatggcattatccgtacccttgagctacctgtgtatgta
acacgagttgctgggagctctgtgtattgtctggatcgccaagttacaccaagagttctc
accatcgactccacagagttccgatttaagttggctctggtgcaacgtaaatatgatgag
gtattgcaaatggtcagaggagccaaacttgtgggtcagtccattattgcctacctgcag
aagaagggttacccagaagtagctctacactttgtcaaagatgagcgcacccgtttcatt
ttggcacttgagtgtggaaatattgatgttgcactagaagcagccaaagctttggatgac
aaaggttgctgggagaagcttgctgaacatgctctcttacacggcaatcatcctgtcgtt
gaatactgctatcagcagacaaagaattatgacaagttgtccttcctgtacttgataact
ggtaatattgcaaagcttcgaagaatgatgaaaatcaacgaaatccgcaaagattacgaa
ggatggtacacaaatgctctctatttgggtgatgtacctgaaaggatcagagtcttgaaa
gcatgtggtaaaacatctttggctttacttactgcttccacacatggttaccaacaggaa
actgaatctcttgcagcccatgttgaagctggaagtatcccagagcctttaccaagtgct
cagttactgcagcctccaatgcctgtacagcctatggatacagcttggcctctcctaaca
gtggccaaaggattcttcgacacagctgtggcaagtggcaaggcagcttctggaactgct
gcagctatggctgtagatgatgttggtgatatagctggtgatggatggggtgatgatgac
gaggagaacgtagaggatggggaactacaagctgaaggtggtgatggtgaaggtggtgga
tgggaggtcgatgacgaccttgacctgcctccagaactggagggcacatcctctgctgca
gcagggactggagaagatgggtattatgtgcctccccctcgaggtcatcctcctactcat
ggatggacccagcgcagccagcttgctattgatcacgttcttgctggagcctttgagtct
gcaactagattgctacatgatcaggttggcgttgtgaactttgaaccctacagggatttg
ttcctttcgtcatatgctcattctcgcacaagctaccctggtgcacctgcacttccatct
ctgtctggttaccctgcccgtaactggagaacagcgcaacttaaagatcagcttccagct
gttgggatgcgtctatctaacctcatggacagactgaaggaagcatcacagttgaccaca
gctgcaaagttctcagaagctgttgacaaattaagagcaatcctcttggctgttcccctt
attgttgttgacacaaaacaagaggtaactgaggcacagaacttgctccgtgtatgcaaa
gagtatgtattaggaatcaccatggaacttcacagaaagactttgggaaagacttcacca
gatgatctcaagagatctctggaacttgcagcctacttcactcactgtgaacttcagcct
ggccaccaaatcctcactctcagaacagctgttaacttggccttcaaaatgaagaattat
aagatggccatgagttttggtcgtcgccttctaaaccttggtccaaggccagaagtagcc
cagaatattaggaaggttgttcaggcatgtgaaaagaacccagctgatgaattggcagtc
cagtatgatgaacataatcctttcacaatgtgtgccagctcttatgtgccaatataccga
ggaaaaccagaagtacagtgtcctctgtgtggagcctcatatcttccagagcacaagggt
atcacatgtaccatctgctgtgtggcacaagttggcaaagattgcattgggcttcgtata
tcacccttacagtttcgatga
DBGET
integrated database retrieval system
