Macrobrachium nipponense (oriental river prawn): 135220913
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Entry
135220913 CDS
T09903
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnz04131
]
135220913
Membrane trafficking [BR:
mnz04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
135220913
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
135220913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_HPS5
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_IFT140_1st
Synaptobrevin
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_VPS8
Lgl_C
WD40_like
Motif
Other DBs
NCBI-GeneID:
135220913
NCBI-ProteinID:
XP_064114611
LinkDB
All DBs
Position
2:complement(111065632..112091381)
Genome browser
AA seq
1526 aa
AA seq
DB search
MDSRTSRPLWRSIPYRRCLAVGTKHGSIRLIGRPGVDVHIRHESEAAVLHMLFLINEGAL
VSATADDVIHLWNYRQKRPEIVHSLKFQRERITCLFLPFQSKWLYVGTERGNIHVVNIEV
FLLSGYTINWNKAVELSRKTHPGAVVHLSDCPVDPSKLLIGYDSGSLVVWDLKNKAADVR
YHCAEPLKSISWHHEGKQFMCSHSDGSLTTWAIKQATSKPVSAIFPHAKTNKEGKQEPCK
CIQKVEWKCSKNGDTFVIFSGGLTNDRAGRTPSITVIHGKTTTVLEMEHNVVDFITLCES
PFASDFAEPYALVVLLHNDLVVVDLHTQGYPCFENPYSMDLHESPVTCCTYLADCPADLI
PAFYSVGARGQKRQGFSEREWPISGGEWGSSCSYAEMIITGHADGTVKFWDASSVSLQVL
YKLKTAKVFEKPRTRSIDGDEDPFAIQHIFLCPESRLLCIAGATAHVVLFKYFKQETTGE
VPCLEIPIVYEVYESGDCSPEYEFPPRPTLQVAHSPHHTAAGEASDKKPSDKKGHSQSPN
HRKKKGASLDYFVPIRVRGGSQKKAAGYQADLVCLTPWVDGEPPGSISALSINSSYGLLS
YGNESGLVIVDYIAKSCLLNMGTPELYGNADPYQRVPRSPKRADSSKEDERCKSPSSDQD
VKDIGASVFYLRHDQSDLNGLNKRECKDDLRDSKKMVSRSDSKGKGDLEIRKYLMRKDSR
GVDKGKEDKKNNESKTGSDLKKLLTRKESKTKDKEEKDIRKDSEKEDKSDDPLVYKKQQM
LSEGRSLGVEETDTNEGKLETAVSLELGTEMARERAVAHENIPKAELRENKSSVVEAKRQ
TRFRLKAQFNKLDARFRKAFSSENNSSMENNTEFYVDDEIVVVGDDGEMKSEAVSEIIDD
KSSNSEQVEVGEEMTENGGYMPDESKGKEYLEVHSNSMTGTSPKGSPRSSPKPSPKTTPK
PSPMDEAIILEQLVDDESKVKEMSDARSALILFDEDGNPVPPPRRKVRLAESKQKVIQNT
VESVDLDKEMALVSVQDESQGTESTTMPATTPVDKEESTSVSQRHSYRSQGSEGTPHTPG
QVASTGVTVTSPNSKGAFKSFVSHITKKSSSQALQDKLDGSFSRSRSSSISSLENISSEA
IQCLAFADSYTRKNDSQMAPTLWVGTSLGSVIQVMVSIPPLETRLSTPATVIPSGTIFRL
KGSVLAMSFLDCNGALIPYQYESWRDANKEKKLERTPTKSLVDNRMSPTNSGEQTWGDRQ
FIVIGSEKVARVVALPSQNCVYKQIITEVSFVVKAEIIQIKDSVCLVCYVATGHISVFSL
PSLRQLIYVDFLPLVDLSFQTRKTGIVDPMLSIWGQQMFVNEDTDQIARTFCFTNYGHGM
YLCSPTEIQKFTLASDFCKELQNLLGELFQPHDMPEPPKQSFFKGLFGGGVSQLDREELF
GESSGKGSRSVAKHVPGPTAQLEALNAKAGSVAGDIARTRMLMVERGQKLSELEERTGRM
MNESESFSTAAHQLMLKYKDKKWYQL
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggattcccgtaccagccgacctctctggcgttcgatcccatacagaaggtgtttggcc
gtcgggaccaaacatggatctatcaggcttattgggcgccctggcgtggacgtgcatatc
cgacacgaatcggaggctgctgtacttcacatgctgttcctcattaatgaaggagccctc
gtctctgccacagctgacgacgtcatccacttgtggaactaccgacagaagcgcccagag
atcgtccattccctcaaatttcagcgagaaaggatcacgtgtctgtttctccccttccaa
agcaaatggttgtatgtgggcacagaacgcggcaatatccacgtcgtcaacatagaggtc
ttcctactttctggttacacaatcaattggaataaagccgttgaactgtcccggaagact
catcctggtgcggtggtacatctcagtgactgccctgttgatcctagcaaactccttatt
ggctatgacagtggatcacttgtcgtgtgggatctaaaaaacaaagcagccgatgttcgc
tatcattgtgcagagcccttgaagtccatcagctggcaccatgaagggaaacaattcatg
tgctctcactcagatggctccctcaccacatgggccatcaaacaggctacttcgaaacca
gtctcagctatttttccacatgcaaaaaccaacaaagaaggtaaacaggagccatgcaaa
tgtatacaaaaagttgaatggaaatgtagtaaaaatggggatacgtttgttatattttcc
ggtggtcttactaatgacagagctgggagaacaccaagtataactgtcattcatggcaag
acaacaacagttttagaaatggaacacaacgttgtggatttcattacattatgcgagtct
ccttttgcaagtgattttgcagaaccttatgccttggtggtgttattacacaatgaccta
gtggtcgttgatctccatacacagggctatccatgctttgaaaatccatattctatggat
ttgcatgaatcacctgtgacatgttgtacatatttagcagactgtccagctgacctcatt
ccagcattttactctgttggtgctagaggacagaagagacaaggttttagtgagcgagaa
tggccaataagtggtggagaatggggctcctcttgtagttatgcagaaatgataattaca
gggcatgcagatggaactgtcaaattctgggatgcatcatcagtgagtttacaagtgtta
tataagttaaaaactgcaaaagtatttgaaaaaccacggactagaagtatagatggggat
gaagacccttttgcaattcagcatatttttttatgtccagaatctaggttattatgtata
gcaggtgctacagcgcacgttgttctcttcaagtacttcaagcaagaaacgactggtgaa
gttccatgtctggagatccctatcgtttatgaagtgtatgaatcgggggactgctcgcca
gaatatgaatttcctcctcgtcccacccttcaggtagctcatagtccccaccatacagct
gctggggaagcctccgataaaaaaccctcagataaaaagggtcacagtcaaagtccaaat
catagaaaaaagaaaggtgcatcactcgactattttgtacctattcgtgtacggggagga
tcacaaaagaaggcagcaggataccaagcagacctagtgtgcctcactccctgggttgat
ggagaaccaccaggttccataagtgcgttgtctatcaactcatcatatggcttgctttca
tatggtaatgagagtgggttagtgattgtggactacattgccaagtcttgccttttgaac
atgggaacgccagagctttatggtaatgctgacccttatcaaagggttcctcgttctcca
aaacgtgcagattcttccaaagaagatgagagatgcaagtcaccctcctcagatcaggat
gtaaaagatattggagcttctgtattctatctacgacatgaccaaagtgacctcaatgga
ctgaataaaagagaatgtaaggatgacctcagggattccaaaaaaatggttagtcgcagt
gacagcaagggaaaaggtgatctagagataaggaagtatcttatgagaaaagatagtagg
ggtgtcgacaaaggaaaagaagataagaagaacaatgaatcaaaaactggatctgatctt
aaaaaactcctgactcggaaggaaagtaaaactaaagataaagaggaaaaagatattaga
aaagattcagaaaaagaagacaaatctgacgatcctctggtttacaaaaagcagcagatg
ctctcagaagggagaagtttgggagttgaggaaaccgacactaatgagggaaaactggaa
acagcagttagccttgaacttggtactgagatggcaagggaaagagctgtagcgcatgag
aacattccaaaagcagaattacgtgaaaataagtctagtgttgtggaggctaaaagacaa
accaggtttaggttgaaagcccagttcaacaaacttgatgctagatttcgtaaagcattt
tcttcagaaaataattcttccatggagaataacacagaattttatgttgatgatgaaata
gtagtcgttggtgatgatggagaaatgaaaagtgaagcagtcagtgaaatcattgacgat
aaatccagtaattcagagcaagtagaagtaggggaggaaatgaccgaaaatggaggatat
atgccagatgaaagtaaaggaaaggagtatcttgaagtgcatagtaattctatgactgga
acaagccccaaaggtagtccaagaagcagtcccaaaccaagtcctaaaacaacaccaaaa
ccaagtcctatggatgaagcaataattcttgaacaactagttgatgatgagtcaaaagta
aaagaaatgagtgatgcaaggtctgcacttatactttttgatgaggacggtaatccagtt
cctccacctcgaaggaaagttcgccttgcagaaagtaaacaaaaggttatacagaatact
gtggaatccgtggatttagataaagagatggccttagtttcagtccaggatgaatctcaa
ggcacagaaagtaccaccatgccagccactacgcctgtggacaaggaagaatcgacatca
gtcagtcaaaggcattcttacagaagtcagggttcagagggaactcctcacacacctggt
caagttgcatcaactggggttactgtaaccagcccaaacagtaaaggagcattcaagtct
tttgtcagccatatcacaaagaagagttcatcacaagcattacaggacaagctagatggg
tcatttagtcgatcccgatcatccagtattagcagccttgaaaacattagtagtgaagca
attcagtgtctggcctttgctgactcatatacaagaaaaaatgattcacagatggcacca
acgttatgggttggtacaagtttaggttctgttattcaagttatggtttctatacctccc
ctagaaacaagattatcaacaccagctacagttattccaagtggtactatatttcggttg
aaaggatcggttttggccatgtctttcttagactgcaatggagctctgataccttatcaa
tatgagtcttggagagatgctaataaggagaaaaaattagagagaacacctacaaaatct
ttagttgataacagaatgtctcccacaaactcaggagaacagacgtggggagacagacag
tttattgtaattggctctgaaaaagttgctagagttgttgcattaccatcccaaaattgt
gtgtataaacaaataatcacagaggtttcctttgtggtaaaagcagaaataatccaaata
aaagatagtgtttgtttagtatgttatgtggcaactggtcatatatcggtcttcagttta
ccaagtcttcggcagttgatatatgtggactttcttcctttagttgatttaagttttcag
acgaggaagactggtatagttgatcctatgctgtctatttggggtcagcaaatgttcgta
aatgaagatactgaccaaattgcgaggactttctgctttacaaattatggtcatggaatg
tatttgtgttctccgactgaaattcaaaagtttacattggcttcagatttctgcaaggaa
cttcaaaatttattaggagaattgtttcagcctcatgatatgcctgagcctccaaagcaa
agctttttcaaaggacttttcggcggaggagtctcacagttggaccgtgaagagcttttt
ggtgagtcttcagggaagggttcacggagtgttgccaaacatgtaccaggacctacagct
caactagaggctctgaatgcaaaagctggttctgttgcgggtgatattgccagaacacga
atgttaatggtagagagagggcagaaacttagtgaattagaagaacggactggtcgtatg
atgaatgaatcagagtcattctccacagctgctcaccagctaatgctcaagtacaaggac
aagaagtggtatcaactttga
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