Macrobrachium nipponense (oriental river prawn): 135220946
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Entry
135220946 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: F-box only protein 11-like
KO
K10297
F-box protein 11
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnz04121
]
135220946
Ubiquitin system [BR:
mnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135220946
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
F-box_5
F-box_4
Motif
Other DBs
NCBI-GeneID:
135220946
NCBI-ProteinID:
XP_064114671
LinkDB
All DBs
Position
2:complement(118751208..118854303)
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AA seq
964 aa
AA seq
DB search
MSNPTFRTRISQLRKRKLTKKKIVRRGNPINRRNNDDDCEAPLVGGPPLALFDLVGGGAA
AAAAGAGPSSVPTASSSSTTSSLHHHPPYHLRRKSPTHPVSPPTTLGAISVTDTPSTAAS
AGASAVTAGLPSAATSNTPVLSPPVALTATTAYCPFQLTMLPARKRPRRTYSTGXSSTGL
GCTLSTAAHYLLYELPDEVLLTIFSYLYERDLCHVAQVCKRFYTIANDNELWKNLYQSLY
EYDLPLFNPAPCKFDFVQPEDCDYDNPWKESFKQLYHGVHVRPGHQKHVAKEAGRSVAYF
DTIQSAFDYCDDAERPLVLIHSGVYCGELIVIETNIAFIGAAPGNVAENVILERECESTV
MFMEGAQRAYLGYVTIKFSPPSCTDTMQHHKHYALEIQENCSPTIEHCIIRSFSHLGAAV
SVSGPGAEPVIRYCEISDCENVGLIITDRAQGHYEDNEISRNALAGIWVKNFANPIMRRN
HIHHGKDVGIFCFDGGQGYFEANDIHNNRIAGFEVKAQANPTVVRCEIHNGQTGGIYVHE
HGMGQFIENKIHSNKYAGVWITSNSNPTIRRNEIYNGLQGGVYIFGDGRGLIEHNNIYGN
ALAGIQIRTNSDPIVRHNKIHDGQHGGIYVHEKGQGLIECNEVYANTLAGVWITTGSTPT
LRRNRIHSGKQVGVYFYDNGHGLLEDNDIFNHLYSGVQIRTGSNPNIRRNKIWGGQNGGV
LVYNGGLGLLEQNEIFDNAMAGVWIKTDSNPTLRRNKIFDGREAGICIFNGGKGVLEDND
IFRNAQAGVLISTQSHPTQSHPILRRNRIYDGLAAGIEITNNATATLENNHIFNNRFGGL
CLASGVNPIERANKIFDNHDAVQKAVTSGQCLYKISSYTSFPMHDFYRCRTCNTTERNAI
CVNCIKTCHSSHVVEFIRHDRFFCDCGAGTLNNQCQLQGEPTQDTDTLYDSAAPIESQSL
MAEV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcccacattcagaacacgtatatcacaactgagaaaacgaaaactaaccaaa
aagaaaatagtgagacgagggaatcctataaatcgacgaaataatgacgatgactgtgag
gcccctttagtaggtggaccaccactggctctttttgatctggtgggcgggggagcggct
gctgcagcggcaggtgcaggcccctcttccgttcccactgcctcctcctcctctaccacc
tcatcattacaccatcacccgccataccacttacgtagaaagtcacccactcaccctgtt
agtccccctactaccttaggagccatctcagtcacagacactccaagcacagccgcttca
gcgggagcgtcggcagtgacagctggtttaccttctgctgctacaagtaacacacctgta
ttatcacctcctgttgcattaacagcaacgactgcatactgtcctttccagcttaccatg
ttacctgcccgcaaaagaccccgaagaacgtattctacggggnaatcttccacagggttg
ggatgcactttatccacagcagcgcattaccttctatatgaacttcctgacgaggtgcta
ctcactatattttcttacctgtatgagagggacctctgtcatgtagcacaagtatgcaag
cgtttctacacaatagcaaatgataatgaactttggaaaaacctatatcagagtttatat
gagtatgacctaccattatttaacccagccccttgcaagtttgactttgtccagccagag
gactgtgattatgataacccatggaaagaaagctttaagcagttatatcatggggtacat
gttcggccaggacatcaaaaacatgttgccaaggaagccggtcgatctgttgcatacttc
gacactatacagtccgcttttgattattgtgatgatgccgagagacctctggttttaatt
cactcaggtgtttattgtggagaacttattgttattgaaaccaatattgccttcattgga
gctgcacctggaaatgtggcagaaaatgtcattttggaacgagaatgtgaatctacagta
atgtttatggaaggggctcaacgggcatatctaggctatgttaccatcaagttttcaccg
ccaagttgcactgatactatgcagcaccacaaacactatgcgttagaaattcaagaaaat
tgttcacctaccatagagcattgcattattcgaagtttctctcatttgggagcagctgta
agtgttagcggtccaggtgcagaaccagtaattcggtattgtgaaatcagtgattgtgaa
aacgttgggctcatcatcacggacagagcacagggtcactatgaggacaacgaaattagc
cggaatgcattagctggaatttgggtcaagaattttgccaatcctataatgagaagaaac
catatccaccacgggaaggatgttggtattttctgttttgatgggggccaaggatatttt
gaggcaaatgatatccataataatcgcatagcaggctttgaagtgaaggcacaggcaaat
ccaacagtagtgcgttgtgaaattcataatggccagactggaggaatatatgtccacgag
catggcatgggtcagtttattgagaacaagatccattcaaataaatatgcaggcgtgtgg
ataacttcaaatagtaacccaactataagacggaatgaaatatataatggactgcaaggt
ggtgtctacatatttggagatggtcgaggcttaattgaacacaataacatatatggtaat
gcactagctggaatccagattcgaaccaatagtgatcctatagtacggcacaataagatc
catgatggtcagcatggtggaatttatgtacatgaaaagggtcaaggcttaatagaatgc
aatgaagtatatgccaacacacttgctggagtttggattactacaggaagcacaccaact
ttacggagaaatcgtattcactcaggaaagcaagttggtgtatatttttatgacaatggt
catggtctcttagaagataatgacattttcaaccacttatactcaggtgtacaaataaga
acggggagcaaccccaacatcagacgaaataaaatttggggaggccaaaatggaggagtg
ttagtatacaatggaggcctgggtctcttggaacaaaatgaaatatttgataatgcaatg
gctggtgtatggatcaagactgatagtaatccaactcttcgaagaaacaagatctttgac
ggaagggaggctggaatttgcatatttaatggtggaaaaggtgtacttgaagacaatgac
attttccgtaatgcccaggctggggtcttgatttcaacacaaagccatccaactcaaagt
catcctattttgagaaggaatagaatatatgatggcttagcggctggcattgaaataacc
aataatgctactgcaaccctagaaaataaccatatttttaataatcgttttggtggtttg
tgtttagcatctggggtcaacccaattgagcgagctaataagatatttgataaccatgat
gcggtacagaaagcagtaacaagtggtcagtgcctgtataagatttcatcctacacaagt
ttcccaatgcatgacttctatcgctgtcgtacatgcaatactacagaacgtaatgccatc
tgtgtgaattgcatcaaaacatgtcatagcagtcatgtggtggaatttataaggcatgac
aggttcttttgtgactgtggtgcaggaactttaaataatcagtgccaacttcaaggtgaa
cctacacaagacaccgatactctttatgactctgctgcacccatcgaatcacaatctctc
atggcagaagtttaa
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