KEGG   Macrobrachium nipponense (oriental river prawn): 135222722
Entry
135222722         CDS       T09903                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mnz  Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135222722
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mnz03041]
    135222722
Spliceosome [BR:mnz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    135222722
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 WDR55 PRP4 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SCAP eIF2A Beta-prop_SPT8 Beta-prop_WDR19_1st Nbas_N WD_LRWD1
Other DBs
NCBI-GeneID: 135222722
NCBI-ProteinID: XP_064116998
LinkDB
Position
8:complement(44294817..44297788)
AA seq 507 aa
MSDGEDSPVGAGGGNARERQWYGSLGATMGGADSPSETPSSPANSNIHTSNEYMELDEPE
MLDEKKALLEEFERKRRARMIHVTTDDSEVKQQLRQLGEPICLFGEGPADRRNRLKELLS
RLGEDALKKTASDKQEKETTEHTQESPEETWYHEGPKELRDARMFLVNFSIPRARARLKQ
EHLDNQIPEATRTAKRQEIQNKLRAFSLIGSQNADSRPISYCSFSPNGKLLSTSSWSGLC
KVWKVPECTEIQSYHGHNCYVDCVEWHPCATLTMESTALNLVSSGRDGSVQLWSLDSDIP
LGELPTMEARVSRVSFHPSGRFLGACVHDNSWRLWDLEIQEEVLFQEGHSKPVYCLGFQF
DGSLAATGGMDAFGRVWDLRTGKCIMFLSGHQEPILAVDWSPDGYHLVTGSEDNSARVWD
VRARRCIYSIPSHTGIVTGARYDKTGGQYIVTSSYDGSVRVWCHGSFQPLRALEGHGQKV
MGVDISPFDGIIATCSFDRTFKIWGPD
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgtctgatggagaagattcaccagtgggggctggaggtggtaacgctcgtgaacgtcag
tggtatggatcccttggggccacaatgggaggggcagattctccgagtgaaacaccaagt
agccctgctaattcaaacatccacactagcaatgaatacatggaattagacgaaccagaa
atgttagatgaaaagaaagcattgcttgaagagtttgaaagaaagcgacgagcacgtatg
atccacgtcaccacagatgatagtgaggtaaaacaacagctgagacaactgggagaacct
atatgcctttttggtgaaggtcctgctgaccgaagaaatcgattgaaggaacttctctct
agactaggtgaggatgctttgaaaaagactgcatcagataaacaagaaaaagaaaccaca
gaacacacacaagaaagcccagaggagacatggtatcatgagggacccaaagaactcagg
gatgcaagaatgtttcttgtaaatttctcaatacctcgggcaagagccagattaaagcaa
gagcacttagataatcaaattccagaggcaacccgtactgctaagaggcaagaaatacag
aataaattgagagcgtttagtcttattggcagtcaaaatgcagactcaagacccatttct
tattgcagtttcagccctaatggaaagctcttatcaactagttcctggagtggattatgt
aaagtttggaaagttccagaatgcacagaaattcagtcttatcatggacacaattgttat
gtagactgtgttgagtggcatccatgtgcaacattgactatggaatccacagctctcaac
ttagtatcaagtggtcgagatggaagtgtgcagctgtggagcttggacagtgatattcct
cttggagaattaccaaccatggaagcaagagtttcaagagtcagcttccatccaagtggg
aggtttctgggggcatgtgtccatgataacagttggcggttatgggaccttgagatacaa
gaagaagttctttttcaagaaggtcattcaaaaccagtatattgccttggttttcagttt
gatggctctttggctgccactggaggaatggatgccttcggaagagtttgggatttaaga
actggcaagtgtattatgttcttgagtggacaccaggagccaattttggctgttgactgg
tcacctgatggttatcatttggtaacaggcagtgaagataattcagcaagagtttgggat
gttcgagcacgccgttgtatatattcaatcccttctcacacaggcattgtcacaggtgct
cggtatgacaagactggagggcagtatattgtaacaagttcatatgatggctctgtacgt
gtttggtgtcatggctcgttccaacctctccgtgcccttgaaggacatggccaaaaggtg
atgggagttgatatctccccatttgatggcattattgcaacatgttcatttgacaggaca
ttcaagatctggggtcccgactga

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