Macrobrachium nipponense (oriental river prawn): 135223230
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Entry
135223230 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF126-B-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnz04131
]
135223230
04121 Ubiquitin system [BR:
mnz04121
]
135223230
Enzymes [BR:
mnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135223230
Membrane trafficking [BR:
mnz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
135223230
Ubiquitin system [BR:
mnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135223230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_11
zf-RING_2
HypA
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
IBR_1
zf-rbx1
C1_2
zf-RING_5
Zn_ribbon_6
DZR
zf_RING_Vps8
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
135223230
NCBI-ProteinID:
XP_064117792
LinkDB
All DBs
Position
8:complement(31521227..31568740)
Genome browser
AA seq
268 aa
AA seq
DB search
MAEAGVETAASSNRFFCHKCNVEITPNLPDYVCPRCNSGFIEELDGRAENSDSDTSSDMD
LEQFDTWDMLQDVTSGGQGASSSPSGSASGPGTRRSQRLRHLNPRHGRRRVSGGERHALA
PLIHDLIMQMTTGVIEASVGGPEFAGAPIGIDLPGFPVLVASNLASNPGDYAWGXGGLDA
IITQLMNQLDGTGPPPLSRDQISQIPTVNITKDQAEQGLQCSVCMEDFKEDEGVRQLHCE
HCYHSDCIIPWLELVSITFFIWFSCFND
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctggtgttgagacagctgcgtcctctaataggtttttttgtcacaaatgc
aatgttgagataactccaaatttgccggattatgtatgtcctcgttgtaatagtggcttt
attgaagagctcgatggacgtgctgaaaattctgatagtgacacatcaagtgacatggac
ttagagcagttcgatacttgggacatgcttcaagatgtcacatctggtggacaaggtgct
tcatcatcaccatcagggtcagcttcagggccgggaaccaggaggagtcagcgtttaagg
catctcaacccaaggcatgggcgaaggagagtgagtggaggagagagacacgctcttgca
cctctaatacatgacctcatcatgcaaatgacaacaggtgttattgaggctagtgtagga
ggcccagaatttgcaggggcacccataggcattgatctcccaggtttcccagtgttggtg
gcatctaatctagcttcaaatcctggtgattacgcatggggcnagggtgggctggatgcg
atcataactcagttgatgaatcagctagatggaactggtcctcctccattgtccagagat
cagatatctcaaataccaacagttaacatcaccaaagatcaggctgaacaaggactacaa
tgctcagtatgtatggaagacttcaaggaagacgagggtgtgcgtcagttgcattgtgag
cattgttatcacagtgattgtatcattccatggttagagcttgtaagtattacatttttt
atttggttttcatgcttcaatgattaa
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integrated database retrieval system
