Macrobrachium nipponense (oriental river prawn): 135223472
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Entry
135223472 CDS
T09903
Name
(RefSeq) beta-TrCP-like isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04120
Ubiquitin mediated proteolysis
mnz04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135223472
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
135223472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnz04121
]
135223472
03036 Chromosome and associated proteins [BR:
mnz03036
]
135223472
Ubiquitin system [BR:
mnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135223472
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
135223472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_WDR75_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IP5PC_F
Beta-prop_DCAF4
F-box
WD40_like
Beta-prop_IFT140_1st
Beta-prop_WDR11_2nd
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_VPS8
F-box_5
Beta-prop_LRRK2
Elongin_A
DUF4508
Motif
Other DBs
NCBI-GeneID:
135223472
NCBI-ProteinID:
XP_064117960
LinkDB
All DBs
Position
10:complement(23316717..23407995)
Genome browser
AA seq
556 aa
AA seq
DB search
METEPLLDDSLDSVEAPMTVIYDNNTSPMSVTTSTGIRGVDGASDNEDPEPMTTIPLNQS
SGGGGGGGRRKKESTAQYNNEREMCLQYFEKWSEQDQLEFMEHLLSRMCHYQHGHINAFL
KPMLQRDFITLLPKKGLDHVAEKILSYLDAKSLREAELVCKEWHRVIADGLLWKKLIERK
VRTDPLWRGLSERKGWGMYLFKPRPGEQHPGHSYYRKLYPKIIQDIQTIEANWRMGRHNL
QRINCRSENSKGVYCLQYDDQKIVSGLRDNTIKIWDRSSLQCYKVRGVLTGHTGSVLCLQ
YDERVIISGSSDSTVRVWDVNTGEMTNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM
VSPTEINLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWSTGTCEFVRTLNGHKRGIA
CLQYRDRLVVSGSSDNTIRLWDIECGACLRILEGHEELVRCIRFDNKRIVSGAYDGKIKV
WDLQAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNCSPPEG
SGPASGRGCSPTGDAS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggagactgaacctcttttagatgacagcctagattcagtggaggcaccaatgactgta
atttatgacaacaacacgtcaccgatgagtgtcacaacaagtaccggtattcgtggcgtg
gacggggctagcgacaatgaggacccagaacccatgacaaccatacccttaaaccagtcg
tcaggtggcggtggcggcggagggaggaggaagaaggaatccacagctcagtacaacaat
gagagggagatgtgccttcagtattttgagaagtggagcgaacaagaccagctggaattc
atggagcaccttctgtctcgcatgtgtcactaccagcatggtcacatcaatgccttcctc
aagccaatgctgcagagggacttcatcaccttgttaccaaagaaaggactagatcatgta
gcagaaaaaattttaagttacttggatgccaaatcattacgggaggcagagctagtttgt
aaagaatggcatagagtaatagcggacggtctcttatggaaaaaattaatagagcggaaa
gttcgaacagatcctttgtggagagggctgtcagaacgtaaagggtgggggatgtatttg
ttcaaaccaagaccaggtgaacaacatcctgggcactcctactatcgtaagctttaccct
aagataatccaagatattcaaaccatagaagctaattggagaatgggtagacataatttg
cagagaataaactgcagatcagaaaattccaaaggagtatactgtttacaatatgatgac
cagaaaattgtgtctggccttagagacaacactattaaaatttgggaccgaagttcgctc
cagtgttacaaggtacgaggggtgttgacaggtcacacgggttcagtattgtgcctacag
tacgacgaacgtgtaattattagcggctcctcagactcaactgtcagagtctgggatgtg
aacactggggagatgaccaacactttgattcatcattgtgaggccgttctccaccttcgc
ttcaataacggaatgatggttacgtgttctaaggaccgttcaattgctgtgtgggatatg
gtatcgcctacggaaatcaatttaagacgggtgctagttggtcaccgagcagctgttaat
gttgttgatttcgatgaaaaatatattgttagtgcttctggtgatagaactattaaggtt
tggagtacagggacgtgtgaatttgtacggacgctcaatggtcataaaaggggcattgct
tgcctacaatacagagatagactagtcgttagcggttcttcagataatacgataagatta
tgggatatagagtgcggcgcatgtttaagaattttagagggtcatgaagaactagtccgc
tgtatacgatttgacaacaaaaggatagtatctggagcatatgatgggaaaatcaaggtg
tgggatctccaagcagcattggatccaagagcaccagcaggcactctatgtcttcgaact
ttagttgaacattccggccgagtgtttcgtctgcagtttgacgagtttcagatagtttct
tcgtctcatgatgacacaatcctcatttgggatttcttgaattgctccccgcccgaaggc
tctgggccagctagtggtcgtgggtgctcaccaacaggagatgcaagctaa
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