Macrobrachium nipponense (oriental river prawn): 135223635
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Entry
135223635 CDS
T09903
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnz03000
]
135223635
Transcription factors [BR:
mnz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135223635
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
TcdA_TcdB_pore
Motif
Other DBs
NCBI-GeneID:
135223635
NCBI-ProteinID:
XP_064118334
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All DBs
Position
10:58602273..58604051
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AA seq
266 aa
AA seq
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MNQVPSPTSASPTGGASKKEDHIKRPMNAFMVWSRMQRRKIAQENPKMHNSEISKRLGSE
WKLLTEAEKRPFIDEAKRLRAQHMKEHPDYKYRPRRKPKTLQKNGYSFPLPYLATSALDP
LGPLHQTYYSTPAVPSPLDVAGEKSRLFPAAATLPPHFYPGFDPQHFSKLAAAQDHYKPM
TSLPCSDSAAAAAASVSAAASMSGMSTVSALYSSLYSKSASSLLSGMSAGLTTGQQQQQA
AAHQAQLYPGYPPAVDQLRRPVSVIF
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggttccgtcaccaaccagtgcctctcctacaggaggcgcttccaagaaggaa
gatcacatcaagcggccgatgaacgcatttatggtctggtctcgtatgcagcgacggaag
attgcccaagaaaacccgaagatgcacaactcggagatttctaaacgcctggggtccgag
tggaagctgctgacggaggccgagaagagaccgttcatcgatgaggccaagaggctgagg
gctcaacacatgaaggagcatcctgactacaagtaccgacctcgcaggaagcccaaaacc
ctccagaaaaacggctacagcttcccgctgccctacctggcaacgtcagcgctcgaccct
cttggaccgctgcaccagacttactactcgactcccgccgtgccctcgccgctggacgtc
gccggggagaagtcgcgtctcttcccagctgccgccaccctcccgcctcacttctatccc
ggattcgaccctcagcatttcagcaaactggcggcagcacaagaccactacaagcccatg
acttcccttccctgttcagactctgcggccgcggctgcagccagcgtctcggccgccgcc
tccatgagcgggatgtcaacggtatcggcgttatactcctccctttattccaagtcggcg
tcctctctcttgtcgggaatgtcagcgggactgacgactgggcagcagcagcagcaggca
gcagcgcatcaggctcaactctacccaggctaccctcccgccgtcgaccaacttcgccgg
cctgtgtcggtcatcttctga
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